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AT1G55120.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Predictors External Curations
SwissProt : extracellular 16381842
TAIR : vacuole 15539469
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:18998720 (2009): extracellular region
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta-fructofuranosidase 5
Curator
Summary (TAIR10)
Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.
Computational
Description (TAIR10)
beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.1); Has 4220 Blast hits to 4164 proteins in 1248 species: Archae - 18; Bacteria - 2575; Metazoa - 95; Fungi - 293; Plants - 1036; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G55120-MONOMERBioCyc:ARA:GQT-2263-MONOMERBioCyc:ARA:GQT-2264-MONOMERBRENDA:3.2.1.80
CAZy:GH32EC:3.2.1.80eggNOG:COG1621eggNOG:KOG0228
EMBL:AB029310EMBL:AC073944EMBL:AK176675EMBL:CP002684
EnsemblPlants:AT1G55120EnsemblPlants:AT1G55120.1entrez:841955ExpressionAtlas:Q67XZ3
Gene3D:2.115.10.20Gene3D:2.60.120.560GeneID:841955Genevisible:Q67XZ3
GO:GO:0005618GO:GO:0005773GO:GO:0005975GO:GO:0048046
GO:GO:0051669hmmpanther:PTHR31953hmmpanther:PTHR31953:SF16HOGENOM:HOG000181427
InParanoid:Q67XZ3InterPro:IPR001362InterPro:IPR013148InterPro:IPR013189
InterPro:IPR013320InterPro:IPR018053InterPro:IPR023296KEGG:00052+3.2.1.26
KEGG:00500+3.2.1.26OMA:HSIVESYPaxDb:Q67XZ3Pfam:PF00251
Pfam:PF08244Pfam:Q67XZ3PhylomeDB:Q67XZ3PIR:G96592
PRIDE:Q67XZ3PRO:PR:Q67XZ3PROSITE:PS00609ProteinModelPortal:Q67XZ3
Proteomes:UP000006548RefSeq:NP_564676.1scanprosite:PS00609SMART:SM00640
SMR:Q67XZ3STRING:3702.AT1G55120.1SUPFAM:SSF49899SUPFAM:SSF75005
TAIR:AT1G55120tair10-symbols:AtcwINV3tair10-symbols:ATFRUCT5tair10-symbols:FRUCT5
UniGene:At.458UniProt:Q67XZ3
Coordinates (TAIR10) chr1:+:20566617..20569165
Molecular Weight (calculated) 67071.00 Da
IEP (calculated) 5.52
GRAVY (calculated) -0.43
Length 594 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKLNRSNIG LSLLLSMFLA NFITDLEASS HQDLNQPYRT GYHFQPLKNW MNDPNGPMIY KGIYHLFYQY NPYGAVWDVR IVWGHSTSVD LVNWISQPPA
101: FNPSQPSDIN GCWSGSVTIL PNGKPVILYT GIDQNKGQVQ NVAVPVNISD PYLREWSKPP QNPLMTTNAV NGINPDRFRD PTTAWLGRDG EWRVIVGSST
201: DDRRGLAILY KSRDFFNWTQ SMKPLHYEDL TGMWECPDFF PVSITGSDGV ETSSVGENGI KHVLKVSLIE TLHDYYTIGS YDREKDVYVP DLGFVQNESA
301: PRLDYGKYYA SKTFYDDVKK RRILWGWVNE SSPAKDDIEK GWSGLQSFPR KIWLDESGKE LLQWPIEEIE TLRGQQVNWQ KKVLKAGSTL QVHGVTAAQA
401: DVEVSFKVKE LEKADVIEPS WTDPQKICSQ GDLSVMSGLG PFGLMVLASN DMEEYTSVYF RIFKSNDDTN KKTKYVVLMC SDQSRSSLND ENDKSTFGAF
501: VAIDPSHQTI SLRTLIDHSI VESYGGGGRT CITSRVYPKL AIGENANLFV FNKGTQSVDI LTLSAWSLKS AQINGDLMSP FIEREESRSP NHQF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)