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AT1G60750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.526
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-linked oxidoreductase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 31420 Blast hits to 31397 proteins in 2613 species: Archae - 665; Bacteria - 20768; Metazoa - 1940; Fungi - 2451; Plants - 1336; Viruses - 0; Other Eukaryotes - 4260 (source: NCBI BLink).
Protein Annotations
EC:1.1.1.-eggNOG:COG0667eggNOG:KOG1575EMBL:AC002292
EMBL:CP002684EnsemblPlants:AT1G60750EnsemblPlants:AT1G60750.1entrez:3767587
Gene3D:3.20.20.100GeneID:3767587Genevisible:F4HPY8GO:GO:0016491
Gramene:AT1G60750.1hmmpanther:PTHR11732hmmpanther:PTHR11732:SF12InParanoid:F4HPY8
InterPro:IPR001395InterPro:IPR020471InterPro:IPR023210KEGG:ath:AT1G60750
OMA:MSDFYTTPANTHER:PTHR11732PaxDb:F4HPY8Pfam:F4HPY8
Pfam:PF00248PIR:H96632PRIDE:F4HPY8PRINTS:PR00069
PRO:PR:F4HPY8ProteinModelPortal:F4HPY8Proteomes:UP000006548RefSeq:NP_176274.1
SMR:F4HPY8STRING:3702.AT1G60750.1SUPFAM:SSF51430TAIR:AT1G60750
UniGene:At.74512UniProt:F4HPY8
Coordinates (TAIR10) chr1:-:22362293..22363854
Molecular Weight (calculated) 36353.60 Da
IEP (calculated) 5.29
GRAVY (calculated) -0.23
Length 330 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEEACQVRR MKLGSQGLEV SAQGLGCMGL SDFYGAPTPE TNAVALLRHA INAGVTFLDT SDIYGPETNE LLLGKALKDG LRDKVELATK FGITASEDGK
101: FGFRGDPEYV RIACEASLKR LGVTCIDLYY QHRIDTTLPI EITIGELKKL VEEGKIKYIG LSEASASTIR RAHAVHPITA VQIEWSLWSR DVEEDIIPTC
201: RELGIGIVAY SPLGRGFLGL PRFQQENLEN NKILYEKVQA MATKKSCTPA QLALAWVHHQ GDDVCPIPGT SKIQNLNQNI GALSVKLTPE EMVELEAIAQ
301: PDFVKGERYD NNMVTYKDSE TPPLSSWKAR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)