AT1G60750.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:vacuole 0.526 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : NAD(P)-linked oxidoreductase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 31420 Blast hits to 31397 proteins in 2613 species: Archae - 665; Bacteria - 20768; Metazoa - 1940; Fungi - 2451; Plants - 1336; Viruses - 0; Other Eukaryotes - 4260 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:22362293..22363854 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 36353.60 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.29 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||
Length | 330 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAEEACQVRR MKLGSQGLEV SAQGLGCMGL SDFYGAPTPE TNAVALLRHA INAGVTFLDT SDIYGPETNE LLLGKALKDG LRDKVELATK FGITASEDGK 101: FGFRGDPEYV RIACEASLKR LGVTCIDLYY QHRIDTTLPI EITIGELKKL VEEGKIKYIG LSEASASTIR RAHAVHPITA VQIEWSLWSR DVEEDIIPTC 201: RELGIGIVAY SPLGRGFLGL PRFQQENLEN NKILYEKVQA MATKKSCTPA QLALAWVHHQ GDDVCPIPGT SKIQNLNQNI GALSVKLTPE EMVELEAIAQ 301: PDFVKGERYD NNMVTYKDSE TPPLSSWKAR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)