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AT1G58350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Putative serine esterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ZW18; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3657 (InterPro:IPR022122), Protein of unknown function DUF676, hydrolase-like (InterPro:IPR007751); BEST Arabidopsis thaliana protein match is: Putative serine esterase family protein (TAIR:AT1G09980.1); Has 500 Blast hits to 403 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 288; Fungi - 4; Plants - 105; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQFKeggNOG:KOG2205EMBL:AB028199EMBL:AC008051
EMBL:AK226788EMBL:CP002684EnsemblPlants:AT1G58350EnsemblPlants:AT1G58350.1
EnsemblPlants:AT1G58350.2entrez:842204ESTHER:arath-ZW18ExpressionAtlas:Q9SLU9
Gene3D:3.40.50.1820GeneID:842204GO:GO:0044255GO:GO:0052689
Gramene:AT1G58350.1Gramene:AT1G58350.2hmmpanther:PTHR12482hmmpanther:PTHR12482:SF5
HOGENOM:HOG000243984InterPro:IPR007751InterPro:IPR022122InterPro:IPR029058
KEGG:ath:AT1G58350OMA:LPLERYEPfam:PF05057Pfam:PF12394
PhylomeDB:Q9SLU9PIR:T52441Proteomes:UP000006548RefSeq:NP_001117514.1
RefSeq:NP_564732.1STRING:3702.AT1G58350.1SUPFAM:SSF53474TAIR:AT1G58350
tair10-symbols:ZW18UniGene:At.448UniProt:Q9SLU9
Coordinates (TAIR10) chr1:-:21663131..21666827
Molecular Weight (calculated) 90904.50 Da
IEP (calculated) 9.75
GRAVY (calculated) -0.30
Length 794 amino acids
Sequence (TAIR10)
(BLAST)
001: MLHRLRWFIG LSKRSREAKT LDAKPYISKV KPVLMVDTVQ EIAIYIHRFH NLDLFQQGWY QIKITMRWED GDNVTRGIPS RVVQYEAPDS GANDSYGVWK
101: IVDKDNSFLT QPFRIKYARQ DIRLCMMISF TLPLERYEGS ATSAAILKFE LMYAPSVDNA SAKQLDTSPV AVHEFRIPPK ALTGLHSYCP VHFDTLHAVL
201: IDVSVHISVL KSAAYKRPAS LSSGVSNSKN VSGSSAQSFK KALGLLASAD KKLVSFVKAL LGARGILLEE MQRLSKAVGQ TIDLSDFVSN MNNVQLSNST
301: STGSGQGKEQ NSLENLNITF DLTSDDWLHE LSKDHLSRIF HLLGTQLHYL WNTLLGFHRD NHTKILEYLR DIWTKDRRAE WSIWMVYSKV EMPHHFINSG
401: MTDILNQSAH KRASGVLNEP AQIAATRAEL HRRSIAQMRI NNRSIQDMHI LGDPMRVPIV IIERVLNAPR RTLSDNSYLR HMDLLDSSLL NGHKDEAEKT
501: KVTNSQQSAR ELKIVVFVHG FQGHHLDLRL VRNQWLLIDP KIEFLMSEAN EEKTHGDFRE MGQRLAQEVV SFLKRKKDRY ARQGHLKSIK LSFVGHSIGN
601: VIIRTAIADS LMEPYRKYLH TYLSLSGPHL GYLYSTNSLF NSGLWLLKKL KSTQVIHQLT LTDDPDLRHT FFYKLCKQKT LENFKNIILL SSPQDGYVPY
701: HSARIESCQP ASFDSSKRGV AFLEMLNNCL DQIRGPVPEA PHQQRVFMRC DVNFDMTVYG RNLNSFIGRA AHIEFLESDI FARFIMWSFQ DLFR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)