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AT1G56560.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant neutral invertase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: invertase H (TAIR:AT3G05820.1); Has 679 Blast hits to 678 proteins in 94 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink).
Protein Annotations
CAZy:GH100EC:3.2.1.26eggNOG:ENOG410IJBSeggNOG:ENOG410XPYN
EMBL:AC009323EMBL:AY120777EMBL:BT008387EMBL:CP002684
EnsemblPlants:AT1G56560EnsemblPlants:AT1G56560.1entrez:842110GeneID:842110
Genevisible:Q9FXA8GO:GO:0004575GO:GO:0005739GO:GO:0005987
GO:GO:0033926GO:GO:0042542GO:GO:0048364Gramene:AT1G56560.1
gramene_pathway:3.2.1.26gramene_pathway:PWY-621hmmpanther:PTHR31916hmmpanther:PTHR31916:SF7
HOGENOM:HOG000232531InParanoid:Q9FXA8InterPro:IPR008928InterPro:IPR024746
iPTMnet:Q9FXA8KEGG:00052+3.2.1.26KEGG:00500+3.2.1.26KEGG:ath:AT1G56560
OMA:FLLKHYWPaxDb:Q9FXA8Pfam:PF12899Pfam:Q9FXA8
PhylomeDB:Q9FXA8PIR:C96607PRIDE:Q9FXA8PRO:PR:Q9FXA8
ProteinModelPortal:Q9FXA8Proteomes:UP000006548RefSeq:NP_176049.1STRING:3702.AT1G56560.1
SUPFAM:SSF48208TAIR:AT1G56560UniGene:At.24588UniProt:Q9FXA8
Coordinates (TAIR10) chr1:+:21192593..21194948
Molecular Weight (calculated) 70440.30 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.26
Length 616 amino acids
Sequence (TAIR10)
(BLAST)
001: MSAIYLLRKI STKTPSRFHR SLFFSTFSKD SPPDLSRTTS IRHLSSSQRF VSSSIYCFPQ SKILPNRFSE KTTGISVRQF STSVETNLSD KSFERIHVQS
101: DAILERIHKN EEEVETVSIG SEKVVREESE AEKEAWRILE NAVVRYCGSP VGTVAANDPG DKMPLNYDQV FIRDFVPSAL AFLLKGEGDI VRNFLLHTLQ
201: LQSWEKTVDC YSPGQGLMPA SFKVRTVALD ENTTEEVLDP DFGESAIGRV APVDSGLWWI ILLRAYGKIT GDFSLQERID VQTGIKLIMN LCLADGFDMF
301: PTLLVTDGSC MIDRRMGIHG HPLEIQSLFY SALRCSREML SVNDSSKDLV RAINNRLSAL SFHIREYYWV DIKKINEIYR YKTEEYSTDA TNKFNIYPEQ
401: IPPWLMDWIP EQGGYLLGNL QPAHMDFRFF TLGNFWSIVS SLATPKQNEA ILNLIEAKWD DIIGNMPLKI CYPALEYDDW RIITGSDPKN TPWSYHNSGS
501: WPTLLWQFTL ACMKMGRPEL AEKALAVAEK RLLADRWPEY YDTRSGKFIG KQSRLYQTWT VAGFLTSKLL LANPEMASLL FWEEDYELLD ICACGLRKSD
601: RKKCSRVAAK TQILVR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)