AT1G56560.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Plant neutral invertase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Plant neutral invertase family protein; FUNCTIONS IN: catalytic activity, beta-fructofuranosidase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: invertase H (TAIR:AT3G05820.1); Has 679 Blast hits to 678 proteins in 94 species: Archae - 0; Bacteria - 126; Metazoa - 0; Fungi - 0; Plants - 313; Viruses - 0; Other Eukaryotes - 240 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:21192593..21194948 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 70440.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.52 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 616 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSAIYLLRKI STKTPSRFHR SLFFSTFSKD SPPDLSRTTS IRHLSSSQRF VSSSIYCFPQ SKILPNRFSE KTTGISVRQF STSVETNLSD KSFERIHVQS 101: DAILERIHKN EEEVETVSIG SEKVVREESE AEKEAWRILE NAVVRYCGSP VGTVAANDPG DKMPLNYDQV FIRDFVPSAL AFLLKGEGDI VRNFLLHTLQ 201: LQSWEKTVDC YSPGQGLMPA SFKVRTVALD ENTTEEVLDP DFGESAIGRV APVDSGLWWI ILLRAYGKIT GDFSLQERID VQTGIKLIMN LCLADGFDMF 301: PTLLVTDGSC MIDRRMGIHG HPLEIQSLFY SALRCSREML SVNDSSKDLV RAINNRLSAL SFHIREYYWV DIKKINEIYR YKTEEYSTDA TNKFNIYPEQ 401: IPPWLMDWIP EQGGYLLGNL QPAHMDFRFF TLGNFWSIVS SLATPKQNEA ILNLIEAKWD DIIGNMPLKI CYPALEYDDW RIITGSDPKN TPWSYHNSGS 501: WPTLLWQFTL ACMKMGRPEL AEKALAVAEK RLLADRWPEY YDTRSGKFIG KQSRLYQTWT VAGFLTSKLL LANPEMASLL FWEEDYELLD ICACGLRKSD 601: RKKCSRVAAK TQILVR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)