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AT1G51700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DOF zinc finger protein 1
Curator
Summary (TAIR10)
Encodes dof zinc finger protein (adof1).
Computational
Description (TAIR10)
DOF zinc finger protein 1 (DOF1); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: DOF zinc finger protein 2 (TAIR:AT3G21270.1); Has 1091 Blast hits to 1086 proteins in 56 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1086; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J0Y6eggNOG:ENOG410YJE1EMBL:AK229106EMBL:BT025772
EnsemblPlants:AT1G51700EnsemblPlants:AT1G51700.1entrez:841595ExpressionAtlas:Q1ECG2
GeneID:841595GO:GO:0003677GO:GO:0006355Gramene:AT1G51700.1
hmmpanther:PTHR31992hmmpanther:PTHR31992:SF23InterPro:IPR003851KEGG:ath:AT1G51700
ncoils:CoilOMA:LASNMQMPfam:O82155Pfam:PF02701
Pfscan:PS50884PhylomeDB:Q1ECG2ProDom:PD007478PROSITE:PS01361
PROSITE:PS50884RefSeq:NP_175581.1scanprosite:PS01361STRING:3702.AT1G51700.1
TAIR:AT1G51700tair10-symbols:ADOF1tair10-symbols:DOF1UniGene:At.256
UniProt:O82155UniProt:Q1ECG2
Coordinates (TAIR10) chr1:+:19174266..19174850
Molecular Weight (calculated) 21683.50 Da
IEP (calculated) 8.94
GRAVY (calculated) -0.96
Length 194 amino acids
Sequence (TAIR10)
(BLAST)
001: MQDLTSAAAY YHQSMMMTTA KQNQPELPEQ EQLKCPRCDS PNTKFCYYNN YNLSQPRHFC KNCRRYWTKG GALRNIPVGG GTRKSNKRSG SSPSSNLKNQ
101: TVAEKPDHHG SGSEEKEERV SGQEMNPTRM LYGLPVGDPN GASFSSLLAS NMQMGGLVYE SGSRWLPGMD LGLGSVRRSD DTWTDLAMNR MEKN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)