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AT1G51590.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha-mannosidase 1
Curator
Summary (TAIR10)
Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation.
Computational
Description (TAIR10)
alpha-mannosidase 1 (MNS1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 47 (InterPro:IPR001382); BEST Arabidopsis thaliana protein match is: alpha-mannosidase 2 (TAIR:AT3G21160.1); Has 2056 Blast hits to 1920 proteins in 193 species: Archae - 0; Bacteria - 7; Metazoa - 790; Fungi - 850; Plants - 172; Viruses - 0; Other Eukaryotes - 237 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G51590-MONOMERBioCyc:ARA:GQT-893-MONOMERBioGrid:26809CAZy:GH47
EC:3.2.1.113eggNOG:ENOG410XP04eggNOG:KOG2204EMBL:AC024261
EMBL:AC025294EMBL:AY081353EMBL:AY128845EMBL:CP002684
EnsemblPlants:AT1G51590EnsemblPlants:AT1G51590.1entrez:841584Gene3D:1.50.10.50
GeneID:841584Genevisible:Q9C512GO:GO:0000139GO:GO:0004559
GO:GO:0004571GO:GO:0005509GO:GO:0005768GO:GO:0005783
GO:GO:0005794GO:GO:0005802GO:GO:0006491GO:GO:0016021
hmmpanther:PTHR11742hmmpanther:PTHR11742:SF42HOGENOM:HOG000181987InParanoid:Q9C512
InterPro:IPR001382KEGG:00510+3.2.1.113KEGG:00513+3.2.1.113KEGG:ath:AT1G51590
KO:K01230ncoils:CoilOMA:PVNNERRPaxDb:Q9C512
Pfam:PF01532Pfam:Q9C512PhylomeDB:Q9C512PIR:E96554
PRIDE:Q9C512PRINTS:PR00747PRO:PR:Q9C512ProteinModelPortal:Q9C512
Proteomes:UP000006548Reactome:R-ATH-964827RefSeq:NP_001031171.1RefSeq:NP_175570.1
SMR:Q9C512STRING:3702.AT1G51590.1SUPFAM:SSF48225TAIR:AT1G51590
tair10-symbols:MANIBtair10-symbols:MNS1TMHMM:TMhelixUniGene:At.26180
UniGene:At.37784UniGene:At.66909UniPathway:UPA00378UniProt:Q9C512
Coordinates (TAIR10) chr1:-:19128315..19132132
Molecular Weight (calculated) 63535.50 Da
IEP (calculated) 6.41
GRAVY (calculated) -0.41
Length 560 amino acids
Sequence (TAIR10)
(BLAST)
001: MARSRSISGY GIWKYLNPAY YLRRPRRLAL LFIVFVSVSM LVWDRINLAR EHEVEVFKLN EEVSRLEQML EELNGGVGNK PLKTLKDAPE DPVDKQRRQK
101: VKEAMIHAWS SYEKYAWGKD ELQPRTKDGT DSFGGLGATM VDSLDTLYIM GLDEQFQKAR EWVASSLDFD KDYDASMFET TIRVVGGLLS AYDLSGDKMF
201: LEKAKDIADR LLPAWNTPTG IPYNIINLRN GNAHNPSWAA GGDSILADSG TEQLEFIALS QRTGDPKYQQ KVEKVITELN KNFPADGLLP IYINPDNANP
301: SYSTTTFGAM GDSFYEYLLK VWVQGNKTSA VKPYRDMWEK SMKGLLSLVK KSTPSSFTYI CEKNGNNLID KMDELACFAP GMLALGASGY GPDEEKKFLS
401: LAGELAWTCY NFYQSTPTKL AGENYFFTAG QDMSVGTSWN ILRPETVESL FYLWRLTGNK TYQEWGWNIF QAFEKNSRVE SGYVGLKDVN TGAKDNKMQS
501: FFLAETLKYL YLLFSPSSVI SLDEWVFNTE AHPLKIVARN DPRKPTIALR QRKFGHQINV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)