AT1G48580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:17958403..17960610 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 50457.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.27 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.71 | ||||||||||||||||||||||||
| Length | 454 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNSQAEVDQW EALDLGDSEL PSFLRPCKRK SPTRSLQPHA QQQNPKAGFN SNTNHRPTLR RCSSPDKFLE ESYSRSLIPG PAGVVQVAIR RKMNKDPKSF 101: NEHGEPIPTQ EFLRKAAEEP DWEDKDFSED PWVSTVDYIR SEGLLSNGGN AIGTPVSEIK RRCDSWGKVD QVVAIVKTCT PNGLGDVMVT LKDPTGTIDA 201: SVHRKVISES EFGRDIRVGA VVILKQVAVC APSRSSTYLN ITLKNISKVI TKDTPVLPNQ NDSEMSAKNH VSVNGLPKQN DSEMSGKNLV PVNENEEYLR 301: LQPNVFSVEQ STTQGIMNNL RQNAKGSSEA LHDIEMVDIN PAEGSKSSPK KGVTKNHCEV RMEQTLLGKH DSISQTEQQL YEDVATETDI ADCIRPAKQI 401: RRSSQSQIDE QESVMGNPDE VTTRTTIHKS QSMASTISLP QWTDEQLEEL FAFD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)