AT1G34200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.973 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glyceraldehyde-3-phosphate dehydrogenase-like family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glyceraldehyde-3-phosphate dehydrogenase-like family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Oxidoreductase family protein (TAIR:AT4G09670.1); Has 11880 Blast hits to 11879 proteins in 1945 species: Archae - 244; Bacteria - 8550; Metazoa - 214; Fungi - 474; Plants - 94; Viruses - 0; Other Eukaryotes - 2304 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12455793..12456935 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38590.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.09 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.00 | ||||||||||||||||||||||||||||
| Length | 352 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSGDNQIRIG LLSCTNKVRK LSRAINLSPN ATISAIATTS SIEEAKSFAK SNNFPPNTKL HSSYESLLED PDVDAVYFPI PTRLHVEWAT LAAIKGKHIL 101: LDKPVALNVA EFDQIVEACE VNGVQFMDGT QWMHSPRTDK IKEFVNDLES FGQIKSVYSC FSFAASDDFL KHDIRVKPGL DGLGALGDAG WYTIQAILLV 201: NNFKLPKTVT ALSGSVLNDA GIVLSCGALF DWEDGVNATI YCSFLANLTM EITAIGTKGS LRVHDFVIPY METEAVFTTS GGGCVSEHKV MTELSQEACM 301: VMEFARLVGE IKNRGAKPDG FWMRFSRNTQ LLVDAVKESI DNNLEPVFLS GR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)