AT4G10130.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.999 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : DNAJ heat shock N-terminal domain-containing protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Zinc finger, DPH-type (InterPro:IPR007872); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT3G13310.1); Has 18672 Blast hits to 18671 proteins in 2948 species: Archae - 158; Bacteria - 7534; Metazoa - 3304; Fungi - 1856; Plants - 1763; Viruses - 10; Other Eukaryotes - 4047 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:6320959..6321483 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 19686.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.38 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 174 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MLVGENCVHE TYYEILSVKE DASYEEIRNS YRSAILHSHP DKLNNTSRSS SDDEKFLKIQ KAWEVLSDAE LRVVYDNDLR SSRHDGITAD EISIEDMSVE 101: ITGDVIDLFY QCRCGDYFCV DSSELGTMGF ALLRDGDFVY VKRLGAFVAS VVLPCGSCSL KTRVWVDSDM KIPI |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)