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AT1G33170.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.968
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G10440.1); Has 1106 Blast hits to 1098 proteins in 101 species: Archae - 5; Bacteria - 135; Metazoa - 1; Fungi - 2; Plants - 950; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Protein Annotations
EC:2.1.1.-eggNOG:ENOG410IIY2eggNOG:ENOG410Y9NVEMBL:AC021045
EMBL:AC027035EMBL:AY140083EMBL:BT009665EMBL:CP002684
EnsemblPlants:AT1G33170EnsemblPlants:AT1G33170.1entrez:840213Gene3D:3.40.50.150
GeneID:840213Genevisible:Q9C884GO:GO:0005789GO:GO:0008168
GO:GO:0016021Gramene:AT1G33170.1hmmpanther:PTHR10108hmmpanther:PTHR10108:SF801
HOGENOM:HOG000238541InParanoid:Q9C884IntAct:Q9C884InterPro:IPR004159
InterPro:IPR029063KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-
KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-KEGG:00380+2.1.1.-
KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-
KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-KEGG:00981+2.1.1.-KEGG:ath:AT1G33170
OMA:WESRILDPaxDb:Q9C884Pfam:PF03141Pfam:Q9C884
PhylomeDB:Q9C884PIR:G86455PRIDE:Q9C884PRO:PR:Q9C884
ProteinModelPortal:Q9C884Proteomes:UP000006548RefSeq:NP_564419.1SMR:Q9C884
STRING:3702.AT1G33170.1SUPFAM:SSF53335TAIR:AT1G33170TMHMM:TMhelix
UniGene:At.15876UniProt:Q9C884
Coordinates (TAIR10) chr1:+:12027262..12030397
Molecular Weight (calculated) 73190.10 Da
IEP (calculated) 6.72
GRAVY (calculated) -0.49
Length 639 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKENSSHSL AEAKRKRLTW ILCVSGLCIL SYVLGSWQTN TVPTSSSEAY SRMGCDETST TTRAQTTQTQ TNPSSDDTSS SLSSSEPVEL DFESHHKLEL
101: KITNQTVKYF EPCDMSLSEY TPCEDRERGR RFDRNMMKYR ERHCPSKDEL LYCLIPPPPN YKIPFKWPQS RDYAWYDNIP HKELSIEKAI QNWIQVEGER
201: FRFPGGGTMF PRGADAYIDD IARLIPLTDG AIRTAIDTGC GVASFGAYLL KRDIVAMSFA PRDTHEAQVQ FALERGVPAI IGIMGSRRLP YPARAFDLAH
301: CSRCLIPWFQ NDGLYLTEVD RVLRPGGYWI LSGPPINWKK YWKGWERSQE DLKQEQDSIE DAARSLCWKK VTEKGDLSIW QKPINHVECN KLKRVHKTPP
401: LCSKSDLPDF AWYKDLESCV TPLPEANSSD EFAGGALEDW PNRAFAVPPR IIGGTIPDIN AEKFREDNEV WKERISYYKQ IMPELSRGRF RNIMDMNAYL
501: GGFAAAMMKY PSWVMNVVPV DAEKQTLGVI FERGFIGTYQ DWCEGFSTYP RTYDLIHAGG LFSIYENRCD VTLILLEMDR ILRPEGTVVF RDTVEMLTKI
601: QSITNGMRWK SRILDHERGP FNPEKILLAV KSYWTGPSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)