AT1G29670.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : GDSL-like Lipase/Acylhydrolase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: apoplast, cell wall, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29660.1); Has 3712 Blast hits to 3673 proteins in 308 species: Archae - 0; Bacteria - 502; Metazoa - 0; Fungi - 62; Plants - 3128; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:10375843..10377717 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 39874.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.63 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.15 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 363 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MESYLTKWCV VLVLLCFGFS VVKAQAQAQV PCFFVFGDSL VDNGNNNGLI SIARSNYFPY GIDFGGPTGR FSNGKTTVDV IAELLGFNGY IPAYNTVSGR 101: QILSGVNYAS AAAGIREETG RQLGQRISFS GQVRNYQTTV SQVVQLLGDE TRAADYLKRC IYSVGLGSND YLNNYFMPTF YSSSRQFTPE QYANDLISRY 201: STQLNALYNY GARKFALSGI GAVGCSPNAL AGSPDGRTCV DRINSANQIF NNKLRSLVDQ LNNNHPDAKF IYINAYGIFQ DMITNPARFG FRVTNAGCCG 301: IGRNAGQITC LPGQRPCRDR NAYVFWDAFH PTEAANVIIA RRSYNAQSAS DAYPMDISRL AQL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)