AT1G29220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : transcriptional regulator family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
transcriptional regulator family protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HCNGP-like (InterPro:IPR012479); Has 6494 Blast hits to 2810 proteins in 258 species: Archae - 2; Bacteria - 128; Metazoa - 3549; Fungi - 437; Plants - 298; Viruses - 183; Other Eukaryotes - 1897 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:10210678..10212571 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39006.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.43 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.08 | ||||||||||||||||||||||||||||||||
| Length | 351 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAPKKSEGIA LLSVYSDEDD EEMEDAEEEE EEDEKQRNQE ESEKIIEEDQ VEEANYMDEE EKGRGGEDSR TPRLLDGVGA SSSAHGTPRS LDNDESSRPD 101: WSNRMIGESG VADGERGDDA SGESSDTLLD QFLPPRPRER CSEELQRKID KFLSLKKMGK SFNSEVRNRK EYRNPDFLLH AVSYQDIDQI GSCFSKDVFD 201: PSGYDPSDFC DAIEIDMKNE RERKEQESKK NQKLDFVSAG TQPGAVFAAQ KPNIPIPGIP ALATSGLPSI PTEIAARDGR PNKKSKWDKV DGDVKNPPLA 301: AGTQDSISSI RSNAALVSAT SAGSGYSAFA QQRRREVEGR RSSERKLERR S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)