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AT1G26810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.964
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : galactosyltransferase1
Curator
Summary (TAIR10)
Encodes a protein with β1,3-galactosyltransferase activity involved in the biosynthesis of the Lewis a epitope of certain glycoproteins.
Computational
Description (TAIR10)
galactosyltransferase1 (GALT1); CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT3G06440.1); Has 2303 Blast hits to 2268 proteins in 112 species: Archae - 0; Bacteria - 4; Metazoa - 1677; Fungi - 5; Plants - 568; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G26810-MONOMERCAZy:GT31EC:2.4.1.-eggNOG:ENOG410ZZ1B
eggNOG:KOG2287EMBL:AC006535EMBL:AY133724EMBL:CP002684
EMBL:EF428439EMBL:KJ138985EnsemblPlants:AT1G26810EnsemblPlants:AT1G26810.1
entrez:839224ExpressionAtlas:Q8L7F9Gene3D:2.60.120.200GeneID:839224
GO:GO:0000139GO:GO:0005794GO:GO:0006486GO:GO:0008378
GO:GO:0010488GO:GO:0010493GO:GO:0016020GO:GO:0016021
GO:GO:0030246Gramene:AT1G26810.1hmmpanther:PTHR11214hmmpanther:PTHR11214:SF129
HOGENOM:HOG000239189InParanoid:Q8L7F9InterPro:IPR001079InterPro:IPR002659
InterPro:IPR013320iPTMnet:Q8L7F9KEGG:ath:AT1G26810KO:K14413
OMA:PLEWINPPANTHER:PTHR11214PaxDb:Q8L7F9Pfam:PF00337
Pfam:PF01762Pfam:Q8L7F9Pfscan:PS51304PhylomeDB:Q8L7F9
PIR:F86394PRIDE:Q8L7F9PRO:PR:Q8L7F9PROSITE:PS51304
ProteinModelPortal:Q8L7F9Proteomes:UP000006548RefSeq:NP_174003.1SMART:SM00908
STRING:3702.AT1G26810.1SUPFAM:SSF49899TAIR:AT1G26810tair10-symbols:GALT1
UniGene:At.41183UniPathway:UPA00378UniProt:Q8L7F9UniProt:W8Q3R0
Coordinates (TAIR10) chr1:-:9286862..9289327
Molecular Weight (calculated) 72326.50 Da
IEP (calculated) 4.95
GRAVY (calculated) -0.25
Length 643 amino acids
Sequence (TAIR10)
(BLAST)
001: MKRFYGGLLV VSMCMFLTVY RYVDLNTPVE KPYITAAASV VVTPNTTLPM EWLRITLPDF MKEARNTQEA ISGDDIAVVS GLFVEQNVSK EEREPLLTWN
101: RLESLVDNAQ SLVNGVDAIK EAGIVWESLV SAVEAKKLVD VNENQTRKGK EELCPQFLSK MNATEADGSS LKLQIPCGLT QGSSITVIGI PDGLVGSFRI
201: DLTGQPLPGE PDPPIIVHYN VRLLGDKSTE DPVIVQNSWT ASQDWGAEER CPKFDPDMNK KVDDLDECNK MVGGEINRTS STSLQSNTSR GVPVAREASK
301: HEKYFPFKQG FLSVATLRVG TEGMQMTVDG KHITSFAFRD TLEPWLVSEI RITGDFRLIS ILASGLPTSE ESEHVVDLEA LKSPTLSPLR PLDLVIGVFS
401: TANNFKRRMA VRRTWMQYDD VRSGRVAVRF FVGLHKSPLV NLELWNEART YGDVQLMPFV DYYSLISWKT LAICIFGTEV DSAKFIMKTD DDAFVRVDEV
501: LLSLSMTNNT RGLIYGLINS DSQPIRNPDS KWYISYEEWP EEKYPPWAHG PGYIVSRDIA ESVGKLFKEG NLKMFKLEDV AMGIWIAELT KHGLEPHYEN
601: DGRIISDGCK DGYVVAHYQS PAEMTCLWRK YQETKRSLCC REW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)