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AT1G26270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.564
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphatidylinositol 3- and 4-kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphatidylinositol 3- and 4-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: phosphoinositide 4-kinase gamma 7 (TAIR:AT2G03890.1); Has 671 Blast hits to 650 proteins in 184 species: Archae - 0; Bacteria - 8; Metazoa - 176; Fungi - 103; Plants - 278; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).
Protein Annotations
BioGrid:24405EC:2.7.1.67eggNOG:ENOG410XP06eggNOG:KOG2381
EMBL:AC079829EMBL:AY035014EMBL:AY058170EMBL:AY075684
EMBL:CP002684EnsemblPlants:AT1G26270EnsemblPlants:AT1G26270.1entrez:839168
GeneID:839168Genevisible:Q9C671GO:GO:0004430GO:GO:0005524
GO:GO:0043424Gramene:AT1G26270.1hmmpanther:PTHR15245hmmpanther:PTHR15245:SF11
HOGENOM:HOG000237755InParanoid:Q9C671IntAct:Q9C671InterPro:IPR000403
InterPro:IPR029071iPTMnet:Q9C671KEGG:ath:AT1G26270ncoils:Coil
OMA:DIDCEDSPaxDb:Q9C671Pfam:PF00454Pfam:Q9C671
PhylomeDB:Q9C671PIR:A86389PRIDE:Q9C671PRO:PR:Q9C671
ProteinModelPortal:Q9C671Proteomes:UP000006548RefSeq:NP_564242.1SMR:Q9C671
STRING:3702.AT1G26270.1SUPFAM:SSF54236TAIR:AT1G26270UniGene:At.20251
UniProt:Q9C671
Coordinates (TAIR10) chr1:-:9089822..9091714
Molecular Weight (calculated) 70262.80 Da
IEP (calculated) 5.02
GRAVY (calculated) -0.42
Length 630 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRKLDSPIK TQMAVALVKS PLNGEFREFN KVGMKTPVGR RRVFVQTETG CVLGLELDRS DNAHTVKRKL QVALNFPIEE SSLTFGDLVL KNDLTAVRSD
101: SPLLLTRNNF HRSSSTPCLS PMRADLQQRR DESSPIEILG NSVSFSFVRQ MAKDITKAVK KGIDPVAVNS GLGGAYYFKN SRGESVAIVK PTDEEPYAPN
201: NPKGFVGKAL GQPGLKRSVR VGETGYREVA AYLLDKEHFA NVPPTALVKI THSIFNVNDG VKASKPMEKM LVSKIASLQQ FIPHDYDASE HGTSNFPVSA
301: VHRIGILDIR ILNTDRHSGN LLVKKLDGDG MFGQVELVPI DHGLCLPETL EDPYFEWIHW PQASIPFSED ELKYIANLDP LGDCEMLRRE LPMVREASLR
401: VLVLCTIFLK EAAANGLCLA EIGEMMTREV RPGDEEPSEI EVVCLEAMSL IGEKDAESPR SDLGNDIEFQ FDIDCEEVTD CTKKLALPLG LTFGNARGQL
501: SKVEETTEDG EEEEEEDREE EENDRADLEK MPTIKLSMSL KSTLLGEKSQ KYQKHPGARV ESAYASSAHR SADEQIPSST SFVKLSDMSE EEWTIFLEKY
601: QELLYPAIEK RKSITLGQKQ RQRLGTSCQF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)