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AT3G12050.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Aha1 domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Aha1 domain-containing protein; FUNCTIONS IN: ATPase activator activity, chaperone binding; INVOLVED IN: response to stress; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Activator of Hsp90 ATPase, N-terminal (InterPro:IPR015310), Activator of Hsp90 ATPase homologue 1-like (InterPro:IPR013538); Has 600 Blast hits to 579 proteins in 214 species: Archae - 0; Bacteria - 24; Metazoa - 217; Fungi - 180; Plants - 73; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5580eggNOG:KOG2936EMBL:AC069473EMBL:AP002040
EMBL:AY087796EMBL:CP002686EnsemblPlants:AT3G12050EnsemblPlants:AT3G12050.1
entrez:820379ExpressionAtlas:Q9LHL7Gene3D:3.30.530.20GeneID:820379
GO:GO:0001671GO:GO:0005829GO:GO:0006950Gramene:AT3G12050.1
hmmpanther:PTHR13009hmmpanther:PTHR13009:SF8InterPro:IPR013538InterPro:IPR015310
InterPro:IPR023393KEGG:ath:AT3G12050OMA:TERNATSPfam:PF08327
Pfam:PF09229PhylomeDB:Q9LHL7Proteomes:UP000006548RefSeq:NP_566410.1
SMART:SM01000SMR:Q9LHL7STRING:3702.AT3G12050.1SUPFAM:0044510
SUPFAM:SSF103111SUPFAM:SSF55961TAIR:AT3G12050UniGene:At.28134
UniProt:Q9LHL7
Coordinates (TAIR10) chr3:+:3839289..3841303
Molecular Weight (calculated) 40186.80 Da
IEP (calculated) 5.63
GRAVY (calculated) -0.48
Length 360 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKFGEGDKR WIVEDRPDGT NVHNWHWSET NCLEWSRNFF TKQFSGVDIL SGEGNLFIKV SKIEKVEGEA YVNVRKGKII PGYELNVSLS WEGEAKDSDG
101: KTLLKADGLV DMPYISDENA DEDPEIRFSV KDEGPIGRTL KEAMVKKGKE IILEKVRVYV EAMARGGPCR DELESKKVAP KSVAAGSATV AVEKSGAAPV
201: VSAAAVESKV VKEKKKAKTK EGFKTITMTE KFNCRARDLY EILMDENRWK GFTQSNAKIS KDVNGPISVF DGSVTGMNLE LEEGKLIVQK WRFGSWPDGL
301: DSTVKIVFEE PQPGVTIVNL THTDVPEEDR YGNATVVENT ERGWRDLIFH RIRAVFGFGI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)