suba logo
AT2G47730.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:30962257 (2019): plastid
  • PMID:30961429 (2019): nucleus
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21539947 (2011): plastid plastid stroma
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16923014 (2006): plastid plastid stroma
  • PMID:16648217 (2006): plastid
  • PMID:14617066 (2003): nucleus
  • PMID:12938931 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : glutathione S-transferase phi 8
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase phi 8 (GSTF8); FUNCTIONS IN: glutathione transferase activity, glutathione binding; INVOLVED IN: in 8 processes; LOCATED IN: in 7 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase PHI 2 (TAIR:AT4G02520.1); Has 15602 Blast hits to 15586 proteins in 1475 species: Archae - 0; Bacteria - 9018; Metazoa - 1960; Fungi - 883; Plants - 1109; Viruses - 0; Other Eukaryotes - 2632 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G47730-MONOMERBioCyc:MetaCyc:AT2G47730-MONOMERBioGrid:4721EC:2.5.1.18
eggNOG:COG0625eggNOG:KOG0867EMBL:AC005309EMBL:AF288176
EMBL:CP002685EMBL:DQ069797EMBL:X95295EnsemblPlants:AT2G47730
EnsemblPlants:AT2G47730.1entrez:819386Gene3D:1.20.1050.10Gene3D:3.40.30.10
GeneID:819386Genevisible:Q96266GO:GO:0004364GO:GO:0004601
GO:GO:0005634GO:GO:0005774GO:GO:0005829GO:GO:0006749
GO:GO:0006952GO:GO:0009407GO:GO:0009409GO:GO:0009507
GO:GO:0009570GO:GO:0009579GO:GO:0009651GO:GO:0009941
GO:GO:0010319GO:GO:0042742GO:GO:0043295GO:GO:0080167
hmmpanther:PTHR11260hmmpanther:PTHR11260:SF201HOGENOM:HOG000125746InParanoid:Q96266
IntAct:Q96266InterPro:IPR004045InterPro:IPR004046InterPro:IPR010987
InterPro:IPR012336iPTMnet:Q96266KEGG:ath:AT2G47730KO:K00799
OMA:AWAKVIDPaxDb:Q96266Pfam:PF00043Pfam:PF02798
Pfam:Q96266Pfscan:PS50404Pfscan:PS50405PhylomeDB:Q96266
PIR:H84918PRIDE:Q96266PRO:PR:Q96266PROSITE:PS50404
PROSITE:PS50405ProteinModelPortal:Q96266Proteomes:UP000006548RefSeq:NP_850479.1
SMR:Q96266STRING:3702.AT2G47730.1SUPFAM:SSF47616SUPFAM:SSF52833
TAIR:AT2G47730tair10-symbols:ATGSTF5tair10-symbols:ATGSTF8tair10-symbols:GST6
tair10-symbols:GSTF8UniGene:At.25017UniProt:Q96266
Coordinates (TAIR10) chr2:+:19558213..19559266
Molecular Weight (calculated) 29233.20 Da
IEP (calculated) 8.93
GRAVY (calculated) -0.22
Length 263 amino acids
Sequence (TAIR10)
(BLAST)
001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)