AT1G26120.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
Isoprenylcysteine methylesterase-like 1 (ICME-LIKE1); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Carboxylesterase, type B (InterPro:IPR002018), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: prenylcysteine methylesterase (TAIR:AT5G15860.1); Has 9242 Blast hits to 9224 proteins in 1573 species: Archae - 109; Bacteria - 5404; Metazoa - 1813; Fungi - 590; Plants - 239; Viruses - 5; Other Eukaryotes - 1082 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr1:-:9028656..9031402 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 52721.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.84 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 476 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MPSQILQISH HLPPKSSPST EMMFKSLIYD DPSTTLLSRF GDDHHTISST VKPLLSRSSS YNGTAMKTSS SSSAGGFTGW YQNRRRRSNS DNCLSAFSDD 101: TNGTADGGNN SGDRQTTIGQ EVGHAAAETF LLTRLCLKLL SYLGVGYRWI TRFMALGCYA FLLMPGFIQV GYYYFFSPYV RRSIVYGDQP RNRLDLYLPK 201: NSTGPKPVVA FVTGGAWIIG YKAWGSLLGQ QLSERDIIVA CIDYRNFPQG SISDMVKDAS SGISFVCNHI AEYGGDPDRI YLMGQSAGAH IAACTIVEQV 301: IKESGEGDSV SWSSSQINAY FGLSGGYNLL NLVDHFHSRG LYRSIFLSIM EGEESLRQFS PELVVQNPNL KHIIARLPPF ILFHGTDDYS IPSDASKSFA 401: ETLQRLGAKA KVILYEGKTH TDLFLQDPMR GGIDEMFEDI VTVVLGDDQE AIGKSVDRRR LVPEFMLKLA HWVSPF |
||||||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)