AT1G21480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Exostosin family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Exostosin family protein; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: FRA8 homolog (TAIR:AT5G22940.1); Has 1205 Blast hits to 1196 proteins in 102 species: Archae - 0; Bacteria - 8; Metazoa - 259; Fungi - 4; Plants - 850; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:7519116..7521426 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52838.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.73 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||
| Length | 462 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASLTSNKPR NFGAYSHYAT PCTRTHQIGA LFLVVSTFFV TRLFDQWFSE SNSVTPVIDL RRTSSSYGIK TDNGIIRWPE RGYGSHLSLK IYVYDENEID 101: GLKELLYGRD GSVKTTACLK GQWGSQVKIH KLLLESKFRT IKKDEADLFF VPAYVKCVRM LGGLNDKEIN QTYVKVLSQM PYFRRSGGRD HIFVFPSGAG 201: AHLFRSWSTF INRSIILTPE ADRTDKKDTT AFNSWKDIII PGNVDDAMTK NGQPDVQPLP LSKRKYLANY LGRAQGKAGR LKLIDLSKQF PDKLECPDLK 301: FSGTEKFGRT TYFEHLRNAK FCLAPRGESS WTLRFYESFF VECVPVLLSD HAELPFQNVI DYAQVSIKWP STRIGSEFLD YLASISDRDI EGMIARGRKI 401: RCLFVYGPDS APCSAVKGIL WELQRKVRHF QQSTETFWLH NGSFVNRELV QFSSWRPPMP LP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)