AT3G48820.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 ASURE: golgi What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycosyltransferase family 29 (sialyltransferase) family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a homolog of the animal sialyltransferases but sialyltransferase activity was not detected (Plant Biology 2009, 11:284). Located in the Golgi apparatus. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: Golgi apparatus, membrane; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 29 (InterPro:IPR001675); BEST Arabidopsis thaliana protein match is: MALE GAMETOPHYTE DEFECTIVE 2 (TAIR:AT1G08660.1); Has 1907 Blast hits to 1892 proteins in 96 species: Archae - 0; Bacteria - 0; Metazoa - 1678; Fungi - 0; Plants - 157; Viruses - 18; Other Eukaryotes - 54 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:18100106..18102852 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49482.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.49 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 440 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKLLHLIFLL ALTTGISAVL IYIIGVSNLY ESNRFTNEDL EALQSLQNGF QKCVSANGLG LQAAMGRDYC KVSINFPKDT VPKWKDPKSG ELEGLSYEFD 101: LCEAVATWEQ VRNSSTILTK EYIDALPNGW EDYAWRRINK GIQLNRCQNK SLCIEKLSLV LPETPPYFPR QFGRCAVIGN SGDLLKTKFG KEIDTYDTVL 201: RENGAPIQNY KEYVGEKSTF RLLNRGSAKA LDKVVELDEK KQEVLLVKTT IHDIMNKMIR EVPIKNPVYL MLGASFGSAA KGTGLKALEF ALSTCDSVDM 301: YGFTVDPGYK EWTRYFSESR QGHTPLHGRA YYQMMECLGL IKIHSPMRAD PNRVVKWVPS RSTIRSARIA AEKLLRRVGA GSADPLASCS IVKKRNKNKR 401: PMVSHLRKPV SDHQKFVRST SMYPVEHSPG HGQLCITPAD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)