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AT2G40190.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-Glycosyltransferase superfamily protein
Curator
Summary (TAIR10)
Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.
Computational
Description (TAIR10)
LEAF WILTING 3 (LEW3); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G78800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
CAZy:GT4EC:2.4.1.131eggNOG:COG0438eggNOG:KOG1387
EMBL:AF085279EMBL:AK227731EMBL:BT009712EMBL:CP002685
EnsemblPlants:AT2G40190EnsemblPlants:AT2G40190.1entrez:818610ExpressionAtlas:Q9XEE9
GeneID:818610GO:GO:0004377GO:GO:0005783GO:GO:0005789
GO:GO:0006487GO:GO:0006490GO:GO:0006970GO:GO:0009737
GO:GO:0009832GO:GO:0016021GO:GO:0097502gramene_pathway:2.4.1.132
gramene_pathway:2.7.7.-gramene_pathway:MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIShmmpanther:PTHR12526hmmpanther:PTHR12526:SF315
HOGENOM:HOG000209670InParanoid:Q9XEE9InterPro:IPR001296InterPro:IPR031814
KEGG:00510+2.4.1.131KEGG:00513+2.4.1.131KEGG:ath:AT2G40190KO:K03844
ncoils:CoilOMA:GTVILAHPaxDb:Q9XEE9Pfam:PF00534
Pfam:PF15924Pfam:Q9XEE9PIR:D84826PRIDE:Q9XEE9
PRO:PR:Q9XEE9ProteinModelPortal:Q9XEE9Proteomes:UP000006548RefSeq:NP_181548.2
SMR:Q9XEE9STRING:3702.AT2G40190.1SUPFAM:SSF53756TAIR:AT2G40190
tair10-symbols:LEW3TMHMM:TMhelixUniGene:At.21597UniPathway:UPA00378
UniProt:Q9XEE9UniProt:W8PUX5
Coordinates (TAIR10) chr2:+:16785232..16787257
Molecular Weight (calculated) 52575.50 Da
IEP (calculated) 7.97
GRAVY (calculated) -0.14
Length 463 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIYFILYTL LTIIFAVSLS LFLSVINARK SRKRAVGFFH PYTNDGGGGE RVLWCAVKAI QEENPDLDCV IFTGDHDSSS DSLARRAVDR FGVHLQSPPK
101: VIHLNKRKWI EESTYPHFTM IGQSLGSVYL AWEALRMFTP LYFLDTSGYA FTYPLARIFG CKVVCYTHYP TISLDMISRV RQRNSMYNND ASIAKSNWLS
201: TCKLVYYRAF SWMYGMVGSC THLAMVNSSW TKSHIEVLWR IPERITRVYP PCDTSGLQAF PLERSSDPPK IISVAQFRPE KAHMLQLEAF SLALEKLDAD
301: VPRPKLQFVG SCRNNSDEER LQKLKDRAVE LKVDGDVQFY KNAMYRELVE LLGNAVAGLH GMIDEHFGIS VVEYMAAGAI PIAHNSAGPK MDIVLEEDGQ
401: KTGFLAETVE EYAEAILEIV KMNETERLKM AESARKRAAR FSEQRFCEDF KTAIRPIFTG PLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)