AT1G15060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Uncharacterised conserved protein UCP031088, alpha/beta hydrolase | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Uncharacterised conserved protein UCP031088, alpha/beta hydrolase; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase, At1g15070 (InterPro:IPR016969), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP031088, alpha/beta hydrolase (TAIR:AT1G73750.1); Has 177 Blast hits to 156 proteins in 44 species: Archae - 2; Bacteria - 72; Metazoa - 2; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:5184053..5186856 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63678.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.62 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||
| Length | 578 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSTMPPQFPL EIRSALRRAS STVYLHRSIS TVTTTPSFRH RTTLLRPRAF SSSSVKLPTK PSLCTADELH YVSVPNTDWR LALWRYLPPP QAPTRNHPLL 101: LLSGVGTNAI GYDLSPGCSF ARHMSGQGFE TWILEVRGAG LSTRVSDLKD VEESAHELSN QIESTARAAA GKETCSDEKQ TTDIMDSSAP APASDVSVVG 201: EASAWDESQL VARLTSTFMS LSERLSGFLS EGQSVFMSAK LFDKIAMLVD DTQLYERFND IRSKLLSLIE SKQNSGLVNQ VRDLAQRLVN LFDDGQRSVS 301: PPLIDLQERL TATIEDFQKQ LDLIVKYDWD FDHYLEEDVP AAIEYVRAQS KPKDGKLFAI GHSMGGILLY AMLSRCAFEG REPSVAAVAT LASSVDYTTS 401: NSALKLLIPL ANPAEALSVP VVPLGALLAA AFPLSTRPPY VLSWLNDLIS STDMMHPEML EKLVLNNFCT IPAKLLIQLT TAFREGGLRD RSGKFYYKDH 501: LPRTSVPVLA LAGDRDLICP PAAVEDTVKL FPENLVTYKL LGEPDGPHYA HYDLVGGRLA VEQVYPCITE FLSHHDSA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)