suba logo
AT1G14840.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30961429 (2019): nucleus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : microtubule-associated proteins 70-4
Curator
Summary (TAIR10)
Encodes a microtubule associated protein (MAP70-4). Expressed in all tissues.
Computational
Description (TAIR10)
microtubule-associated proteins 70-4 (MAP70-4); FUNCTIONS IN: microtubule binding; INVOLVED IN: cytoskeleton organization; LOCATED IN: microtubule, plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Myosin II heavy chain-like (InterPro:IPR009768); BEST Arabidopsis thaliana protein match is: microtubule-associated proteins 70-3 (TAIR:AT2G01750.1); Has 44078 Blast hits to 26830 proteins in 2000 species: Archae - 639; Bacteria - 5780; Metazoa - 22591; Fungi - 3541; Plants - 2515; Viruses - 207; Other Eukaryotes - 8805 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JWTEeggNOG:ENOG41104MMEMBL:AC006917EMBL:AF424584
EMBL:AM086441EMBL:BT002258EMBL:CP002684EnsemblPlants:AT1G14840
EnsemblPlants:AT1G14840.1entrez:838049ExpressionAtlas:Q9LQU7GeneID:838049
Genevisible:Q9LQU7GO:GO:0005737GO:GO:0005874GO:GO:0005886
GO:GO:0007010GO:GO:0008017hmmpanther:PTHR31246HOGENOM:HOG000005796
InParanoid:Q9LQU7InterPro:IPR009768iPTMnet:Q9LQU7ncoils:Coil
OMA:DNEFMNLPANTHER:PTHR31246PaxDb:Q9LQU7Pfam:PF07058
Pfam:Q9LQU7PhylomeDB:Q9LQU7PIR:C86282PRIDE:Q9LQU7
PRO:PR:Q9LQU7ProteinModelPortal:Q9LQU7Proteomes:UP000006548RefSeq:NP_563959.1
SMR:Q9LQU7TAIR:AT1G14840tair10-symbols:ATMAP70-4tair10-symbols:MAP70-4
UniGene:At.26305UniProt:Q9LQU7
Coordinates (TAIR10) chr1:-:5112415..5115299
Molecular Weight (calculated) 67491.60 Da
IEP (calculated) 10.16
GRAVY (calculated) -0.77
Length 604 amino acids
Sequence (TAIR10)
(BLAST)
001: MEERGFMSPS LAISASYREG GSKGMSRRRS MRPSFDADNE FMNLLHGSDP VRIELNRLEN EVRDKDRELS EGQAEIKALR LSERQREKAV EELTEELGKM
101: AEKLKLIENL LESKNLEIKK INEEKKASMA AQFAAEASLR RVHAAQKDDD MPPIEAILAP LEAELKLSRQ EIAKLQDDNK SLDRLTKSKE AALLDAERTV
201: QSALAKASMV DDLQNKNQEL MKQIEICQEE NRIIDKMHRQ KVAEVEKLMQ SVRELEEAVL AGGAAANAVR DYQRKFQEMN EERKILEREL ARAKVNANRV
301: ATVVANEWKD SNDKVMPVRQ WLEERRFLQG EMQQLRDKLA IADRAAKSEA QLKEKFLLRL RVLEESLKGP TSSSSRGTSV GRSSSNGPTR RQSLGGAETS
401: PKITSNGSLI KRTPSSQLRS LTASASTVLK HAKGTSRSFD GGTRSLDRSK VLINGPRSNF PLNHKSSEGT SRGESPSSIK GEEESADKAT NNDSVPGVLY
501: DLLQKEVITL RKAAHEKDQS LRDKDEAIEM LAKKVETLTK AMDVEAKKMR REVAVMGKEV AAMRVVDKGQ QDSKTRRLSV SKGNTAQLLS GRVSGRIGMT
601: RSTQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)