AT1G67040.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.3); Has 89 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25019105..25021922 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 92801.20 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.14 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.64 | ||||||||||||||||||||||||
| Length | 826 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTGELQETTA PCAAITEKRP NRLGGCVGVF FQLFDWNRRF AKKKLFSRKS LLPGKQVSKR FGGNEKMLKS KLNLIDDENR GSFPNRNEVM EVKKHEMRSP 101: SLVARLMGLE SMPSNHRDKG KNKKKKPLFS QIQDTDKCDL FDVEEEEEDS GVDKLRPQKM QRTTGVCDRR VAVKKFGSEA LQIKNVLTRV RKHHQYNHQH 201: QKLASPVRSP RMNRRSSRLI DAAARILEPG KRNAKGAIAY PGSTGIRRFE NAAKEPVVSP EFQCGYNNSV ASCKSCGSLV DVNGSIQVVQ DTGNNMACVS 301: ESTPFQRSKR NVFWRNEDSS VSVSGKDSTD QMVKKALHRA QFKDEMSLPG YRNRSEYHKK VLHREERFPP EARSFALPSK RSCSSPANAI NSKEKDFIAM 401: NRGSTSRSHH SKSPVKFENS DLNLQRKSHT RVEESCNRSG LSTPGRKRRL ACESGHGRGS SSMSPVSRRL DSEYSCACSN ETAFSSLKLG SSNRHYSQCC 501: RETKERRGVQ RVPRPSFTKR PLLDVGTLGL IQQKLKELAS QEEDEANGES GFPNKPASLI LHELLSSLAL QQQPYVRDID MPYRRKGKTE FWSSIGNANS 601: EYTSPGSVLD ASFSNESCFS NSFDNISGQM RLPLEPIEPD WDILEDYATS FKNSTSDGNY QAIASLISHV SNVLRCLSNT GLILTQQRFT IAREVIIHTE 701: LLVGTTTTQE NYLIGPELFD ELMIYAARSD NLVNLPGLTG GFLVDAMIEH LEETNISCGL LKPLTAKQDE LIRGVIEEVP KWARVNMDEV IGIEMDLETH 801: LFGVGSEIAY EILRCLIGEL ATDLYW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)