AT1G14480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.977 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Ankyrin repeat family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G14500.1); Has 8895 Blast hits to 5065 proteins in 313 species: Archae - 10; Bacteria - 564; Metazoa - 4493; Fungi - 246; Plants - 1339; Viruses - 29; Other Eukaryotes - 2214 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:4956404..4957888 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49883.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.00 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.17 | ||||||||||||||||||||||||||||||||||||
| Length | 441 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLRLQQAAE SGSINELYAL IDENPYILEN IDAVPFVSTP LHVAAVFGNI EFAMEMLNLK PSFARKLNTS GYSPLHLAVE KEQSDFVSHM LWHDGGLSRV 101: KGRNGVTPFH LLVIRGDDDL VAECLITSPE CIEDVNVDRQ NALHLAVMND RFEVLQVLTG WIQRMSQKDA YYIENRVLNK RDFDFNTALH LAAYKNDQQA 201: LKLLLKCRLV EPNLVNIDDL TFVDILRTQG ENAGGGNLDL EQAVIKTGCV EAASMPKFKE ESDLLKSPIN FMTYYSTSMK RMKSSTSDQD RGAFLIVCTL 301: IITATYQMAL QPPGGVHQSE NANANAGSVV MKQTFFILLW ISNTVGFCCA VFYTFCLIPL GQLFTIWFFY IGTCLCISYA LAMAVISPHP LVFLSATFAL 401: FLVFALYLLL EAFVDTWRKH RTVVPKSRFS WFWKVLQYYY I |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)