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AT1G12430.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : armadillo repeat kinesin 3
Curator
Summary (TAIR10)
Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations.
Computational
Description (TAIR10)
armadillo repeat kinesin 3 (ARK3); FUNCTIONS IN: microtubule motor activity, binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: armadillo repeat kinesin 2 (TAIR:AT1G01950.1); Has 26314 Blast hits to 21250 proteins in 1081 species: Archae - 170; Bacteria - 1529; Metazoa - 12103; Fungi - 2761; Plants - 3107; Viruses - 18; Other Eukaryotes - 6626 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5059eggNOG:KOG0240EMBL:AB290930EMBL:AC025416
EMBL:AF159052EMBL:CP002684EnsemblPlants:AT1G12430EnsemblPlants:AT1G12430.1
entrez:837799ExpressionAtlas:Q9FZ06Gene3D:1.25.10.10Gene3D:3.40.850.10
GeneID:837799Genevisible:Q9FZ06GO:GO:0003777GO:GO:0005524
GO:GO:0005737GO:GO:0005874GO:GO:0007018hmmpanther:PTHR24115
hmmpanther:PTHR24115:SF437HOGENOM:HOG000241678InParanoid:Q9FZ06InterPro:IPR000225
InterPro:IPR001752InterPro:IPR011989InterPro:IPR016024InterPro:IPR019821
InterPro:IPR027417InterPro:IPR027640iPTMnet:Q9FZ06ncoils:Coil
PANTHER:PTHR24115PaxDb:Q9FZ06Pfam:PF00225Pfam:PF00514
Pfam:Q9FZ06Pfscan:PS50067Pfscan:PS50176PhylomeDB:Q9FZ06
PRIDE:Q9FZ06PRINTS:PR00380PRO:PR:Q9FZ06PROSITE:PS00411
PROSITE:PS50067PROSITE:PS50176ProteinModelPortal:Q9FZ06Proteomes:UP000006548
RefSeq:NP_563908.1scanprosite:PS00411SMART:SM00129SMART:SM00185
SMR:Q9FZ06STRING:3702.AT1G12430.2SUPFAM:SSF48371SUPFAM:SSF52540
TAIR:AT1G12430tair10-symbols:ARK3tair10-symbols:PAKUniGene:At.16100
UniProt:Q9FZ06
Coordinates (TAIR10) chr1:-:4234122..4238552
Molecular Weight (calculated) 100893.00 Da
IEP (calculated) 6.62
GRAVY (calculated) -0.48
Length 919 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTTSGTGGV SYRNGTQRSS LRTQSSASTS SGGQKASVKS KSVLRKSSPA ALGGGSSKSG GGGDAGVPGR VRVAVRLRPR NGEELIADAD FADCVELQPE
101: LKRLKLRKNN WDTDTFEFDE VLTEYASQKR VYEVVAKPVV EGVLDGYNGT IMAYGQTGTG KTYTLGQLGE EDVADRGIMV RAMEDILAEV SLETDSISVS
201: YLQLYMETVQ DLLDPSNDNI AIVEDPKNGD VSLPGATLVE IRDQQSFLEL LQLGEAHRFA ANTKLNTESS RSHAILMVNV RRSMKTRDGL SSESNGNSHM
301: TKSLKPPVVR KGKLVVVDLA GSERINKSGS EGHTLEEAKS INLSLSALGK CINALAENSS HVPFRDSKLT RLLRDSFGGT ARTSLVITIG PSPRHRGETT
401: STIMFGQRAM KVENMVKIKE EFDYKSLSRR LEVQLDNLIE ENERQQKAFV DEIERITVEA HNQISEAEKR YANALEDEKL RYQNDYMESI KKLEENWSKN
501: QKKLAAERLA LGEKNGLDIT SNGNRSIAPA LEEVSELKKL LQKEAQSKMA AEEEVNRLKH QLNEFKKVEA SGNSEIMRLH KMLENETQQK EKLEGEIATL
601: HSQLLQLSLT ADETRRNLEQ HGSEKTSGAR DSLMSQLRLP QIQDPGNAEK PPVARLFEQV GLQKILSLLE AEDADVRIHA VKVVANLAAE EANQQQIVEA
701: GGLTSLLMLL KNTEDETIHR VAAGAIANLA MNETNQELIM DQGGIGLLSS TAANAEDPQT LRMVAGAIAN LCGNDKLQTK LRSEGGIAAL LGMVRCGHPD
801: VLAQVARGIA NFAKCESRAS TQGTKRGKSL LIEDGALSWI VQNAKTETAA IRRHIELALC HLAQHEGNAK EMVKEGAMWE LVRISRDCSR EDIRSLAHRT
901: LTSSPTFLTE LRRLRVDIR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)