AT1G12430.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.998 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : armadillo repeat kinesin 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
armadillo repeat kinesin 3 (ARK3); FUNCTIONS IN: microtubule motor activity, binding, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: armadillo repeat kinesin 2 (TAIR:AT1G01950.1); Has 26314 Blast hits to 21250 proteins in 1081 species: Archae - 170; Bacteria - 1529; Metazoa - 12103; Fungi - 2761; Plants - 3107; Viruses - 18; Other Eukaryotes - 6626 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:4234122..4238552 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 100893.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.62 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 919 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MSTTSGTGGV SYRNGTQRSS LRTQSSASTS SGGQKASVKS KSVLRKSSPA ALGGGSSKSG GGGDAGVPGR VRVAVRLRPR NGEELIADAD FADCVELQPE 101: LKRLKLRKNN WDTDTFEFDE VLTEYASQKR VYEVVAKPVV EGVLDGYNGT IMAYGQTGTG KTYTLGQLGE EDVADRGIMV RAMEDILAEV SLETDSISVS 201: YLQLYMETVQ DLLDPSNDNI AIVEDPKNGD VSLPGATLVE IRDQQSFLEL LQLGEAHRFA ANTKLNTESS RSHAILMVNV RRSMKTRDGL SSESNGNSHM 301: TKSLKPPVVR KGKLVVVDLA GSERINKSGS EGHTLEEAKS INLSLSALGK CINALAENSS HVPFRDSKLT RLLRDSFGGT ARTSLVITIG PSPRHRGETT 401: STIMFGQRAM KVENMVKIKE EFDYKSLSRR LEVQLDNLIE ENERQQKAFV DEIERITVEA HNQISEAEKR YANALEDEKL RYQNDYMESI KKLEENWSKN 501: QKKLAAERLA LGEKNGLDIT SNGNRSIAPA LEEVSELKKL LQKEAQSKMA AEEEVNRLKH QLNEFKKVEA SGNSEIMRLH KMLENETQQK EKLEGEIATL 601: HSQLLQLSLT ADETRRNLEQ HGSEKTSGAR DSLMSQLRLP QIQDPGNAEK PPVARLFEQV GLQKILSLLE AEDADVRIHA VKVVANLAAE EANQQQIVEA 701: GGLTSLLMLL KNTEDETIHR VAAGAIANLA MNETNQELIM DQGGIGLLSS TAANAEDPQT LRMVAGAIAN LCGNDKLQTK LRSEGGIAAL LGMVRCGHPD 801: VLAQVARGIA NFAKCESRAS TQGTKRGKSL LIEDGALSWI VQNAKTETAA IRRHIELALC HLAQHEGNAK EMVKEGAMWE LVRISRDCSR EDIRSLAHRT 901: LTSSPTFLTE LRRLRVDIR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)