AT1G11060.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.753 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : WAPL (Wings apart-like protein regulation of heterochromatin) protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
WAPL (Wings apart-like protein regulation of heterochromatin) protein; BEST Arabidopsis thaliana protein match is: WAPL (Wings apart-like protein regulation of heterochromatin) protein (TAIR:AT1G61030.1); Has 319 Blast hits to 253 proteins in 105 species: Archae - 2; Bacteria - 73; Metazoa - 168; Fungi - 7; Plants - 48; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3684568..3689537 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 103639.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.55 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||
| Length | 930 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIIVKLTANR ICCSLLQLRR SYEHFYIFVF LPEIPLFRFS HLKLFPKNLQ IQRLVSAMME RTYGRRKPGI PRTLSDSLND SVSQTEYLSS SSSPDIEPID 101: YSLLPFSSQE SSSLWHSSSR SNFREDYPQN GGVVRRAKRV RNGAEAAAFT STLLEAQEFG ELMEHEDEVN FALDGLRKGH QLRIRRASLS SLLSICASQH 201: QRRSLRAQGI SQSIIDAILV LSLDDIPSNL AAATLFFALT ADGQDEHFME SPKCIKFLIK LLKPVIVTST EGKPRNIGFK LLSLLKDVDA ARDPVKMDDP 301: SSSDILSRVQ ELLVNCKEMR LNDSYITETT RPELSTKWVA LLAMERACVS KISFDDTSGS VKKTGGNFKE KLRELGGLDA VLEVVMDCHA VMERWVEYDA 401: LSVQEKKDNL HKQSLMLLLK CLKIMENATF LSTDNQNHLL GFKKCLGSHD SRMSFTELTI SVIKMLSGLH LRGGFSSPNT NNVNSHYSNG GNHDSVLEAN 501: RKVTNEVVTI SSDTYSTVGS ISTRNGSVSQ RSQSIIHLDF SPTSMSGSQS SVSGNEPTTS KTRVGSTISG SFAGRLASLG SDIARTTLRT TQAGEPICKK 601: FGEFAPPEES EDPFAFDLED YKPSKWAVVS VNQKKSRAQK KKGCYKQSKD ESLYQLFSSQ EESSNHRLNS QEESSNRDCS TSLQPSHCTN DIDEECLCLL 701: FDCLLTAVKV LMNLTNDNVV GCRQVGGCRG LESMAELIAR HFPSFTRSQL FSEMEKTGSS HQKKDKYLTD QELDFLVAIL GLLVNLVERD GVNRSRLASA 801: SVPITKPEEL QESEQEMIPL LCSIFLTNQG SAETKEETTT FTLDDEEAVL EGEKEAEKMI VEAYSALLLA FLSTESRSIR NSIKDYLPKR NLAILVPVLE 901: RFVAFHMTLN MIPPETHKAV MGVIESCKSP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)