AT1G04210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a putative Raf-related kinase. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G31170.3); Has 130301 Blast hits to 104916 proteins in 2869 species: Archae - 120; Bacteria - 15185; Metazoa - 50195; Fungi - 9983; Plants - 37286; Viruses - 367; Other Eukaryotes - 17165 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:1114696..1119383 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 125164.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.02 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.39 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1112 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MDSKIKKPAN LIEDADIDGG SESDSTISSV LSLEDDSVVD VSGQNLEFSL LDNVDDSVKG LYFFRNVFNL IPKSIGGLGR LRKLKFFSNE IDLFPPELGN 0101: LVNLEYLQVK ISSPGFGDGL SWDKLKGLKE LELTKVPKRS SALTLLSEIS GLKCLTRLSV CHFSIRYLPP EIGCLKSLEY LDLSFNKIKS LPNEIGYLSS 0201: LTFLKVAHNR LMELSPVLAL LQNLESLDVS NNRLTTLHPL DLNLMPRLQI LNLRYNKLPS YCWIPTWIQC NFEGNYEEMG VDTCSSSMVE MDVFETPYEN 0301: NVITVPHKGS HRNPLNMSTG ISSISRCFSA RKSSKRWKRR QYYFQQRARQ ERLNNSRKWK GEVPPEGLSL KMEVEETGKQ GMKVPQNTDR GSVDNSCSDE 0401: NDKLFEEASV ITSEEEESSL KADVVSDNSQ CVETQLTSER DNYESCEIKT SSPSSGDAPG TVDYNSSSER KKPNNKSKRC SEKYLDNPKG SKCHKLSTDI 0501: TNLSRKYSSN SFCSTEDSLP DGFFDAGRDR PFMTLSKYEK VLPLDSREVI LLDRAKDEVL DAITLSARAL VARLKKLNCL TPDVDQVSID NLQVASFLAL 0601: FVSDHFGGSD RTAIIERTRK AVSGTNYQKP FICTCLTGNQ DDLAALNKQV STTAEDAILS DVCEKSLRSI KSKRNSIVVP LGKLQFGICR HRALLMKYLC 0701: DRMEPPVPCE LVRGYLDFMP HAWNIVPVKQ GSSWVRMVVD ACRPHDIRED TDQEYFCRYI PLNRLNESIR IKEKLEPGCS VSSLSTGKGV ERANSSLIRC 0801: KLGSTEAVVK MRTLEVSGAS LDDIRTFEYT CLGEVRILGA LKHDCIVELY GHEISSKWIT SENGNEHRVL QSSILMEHIK GGSLKGHIEK LSEAGKHHVP 0901: MDLALSIARD ISGALMELHS KDIIHRDIKS ENVLIDLDNQ SANGEPIVKL CDFDRAVPLR SHLHGCCIAH VGIPPPNICV GTPRWMSPEV FRAMHEQNFY 1001: GLEVDIWSFG CLIFELLTLQ NPYFDLSELQ IHESLQNGKR PKLPKKLETL ISETEEEEST NKLSEVFDLT ESDLDTMRFL IDVFHQCTEE SPSDRLNAGD 1101: LHEMILSRKK RE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)