AT1G61030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : WAPL (Wings apart-like protein regulation of heterochromatin) protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
WAPL (Wings apart-like protein regulation of heterochromatin) protein; BEST Arabidopsis thaliana protein match is: WAPL (Wings apart-like protein regulation of heterochromatin) protein (TAIR:AT1G11060.1); Has 250 Blast hits to 190 proteins in 72 species: Archae - 0; Bacteria - 2; Metazoa - 174; Fungi - 3; Plants - 50; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:22477969..22482080 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 92938.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.40 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||
| Length | 840 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMERTYGRRK PGMLNDDVSR AEHIFPSSSS PELEPVDFST QESSCVWNYS SRSTFSDNDF SEKRNKRPRN GGGGFGSNST LMEAQEFGEL IENEDEVNFA 101: LDGLKKGHKV RIRRAALSSL LSICESQYQR RSLRALGISQ SIIDAILGLC LDDIPSNLAA ATLFFVLTTD GQDDHFMESP NSIKFLVKLL RPVVSASTKV 201: KPRNIGSRLL SIIKDVDAAR DAASMHDLSS CDIIDRAQEI LVNCKELRLI DSYKIERMRP ELSTKWVALL VMEKACLSKI SFDDTSGTVK KSGGMFKEKL 301: RELGGLDAVF DVVMDCHTVM ESWVTHDTLS VEDIKDDLNK QSLMLLLKCL KIMENATFLS TENQIHLLRL NKSMGSHESR LSFTELMISV IKILSGLQLR 401: AHRNEKHPHP QPHLASAVKK GFVTIISSDT CSTTGFSSIK SLSVSKRNQS AFLVGCSTTP KPGSQSSVMS TIDHCTLTTT AGSNTGSFAG RLASLGSGIS 501: RSKTRTSQTR ESSCKKVENF ASFEDSQDPF SFDLEDSGPS RWAVGKQKKS KGQKRKGSYR DKKDERSLQL FSSQEESNHG LNSQEESSDR DHHVTEQPSL 601: TYDIDKGCLC LLSDCLLTAV KVLMNLTNGN SVGCREVAAC GGLESMAELV VGHFPSFTRS PLYSQMESGT CHQKDKHLTD QELDFLVAIL GLLVNLVEKN 701: GINRSRLAAA SVPITNPEGL QDSEQDMIPL LCSIFLTNKG SADTKDETST FTLDDEEAVL ESEKEAEKMI VEAYSALLLA FLSTESRSIR NAIRDYLPKR 801: DMAILVPVLD RFVAFHTTLD MIPPETHKVV MEVIESCKLP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)