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AT1G08510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27137770 (2016): plastid plastid stroma
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : fatty acyl-ACP thioesterases B
Curator
Summary (TAIR10)
Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.
Computational
Description (TAIR10)
fatty acyl-ACP thioesterases B (FATB); CONTAINS InterPro DOMAIN/s: Acyl-ACP-thioesterase, N-terminal domain (InterPro:IPR021113), Acyl-ACP thioesterase (InterPro:IPR002864); BEST Arabidopsis thaliana protein match is: fatA acyl-ACP thioesterase (TAIR:AT3G25110.1); Has 1275 Blast hits to 1274 proteins in 533 species: Archae - 0; Bacteria - 944; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G08510-MONOMERBioCyc:MetaCyc:AT1G08510-MONOMERBRENDA:3.1.2.14EC:3.1.2.-
eggNOG:COG3884eggNOG:ENOG410IGP7EMBL:AC006932EMBL:AY054679
EMBL:AY059827EMBL:AY064652EMBL:BT008505EMBL:CP002684
EMBL:Z36910EMBL:Z36911EnsemblPlants:AT1G08510EnsemblPlants:AT1G08510.1
entrez:837372Gene3D:3.10.129.10GeneID:837372Genevisible:Q9SJE2
GO:GO:0000036GO:GO:0006633GO:GO:0009507GO:GO:0009536
GO:GO:0016297Gramene:AT1G08510.1gramene_pathway:3.1.2.14gramene_pathway:PWY-5142
hmmpanther:PTHR31727hmmpanther:PTHR31727:SF2HOGENOM:HOG000237896InParanoid:Q9SJE2
InterPro:IPR002864InterPro:IPR021113InterPro:IPR029069KEGG:ath:AT1G08510
KO:K10781OMA:QSHTTVYPaxDb:Q9SJE2Pfam:PF01643
Pfam:PF12590Pfam:Q9SJE2PhylomeDB:Q9SJE2PIR:S69195
PRIDE:Q9SJE2PRO:PR:Q9SJE2ProteinModelPortal:Q9SJE2Proteomes:UP000006548
RefSeq:NP_172327.1SMR:Q9SJE2STRING:3702.AT1G08510.1SUPFAM:SSF54637
TAIR:AT1G08510tair10-symbols:FATBUniGene:At.46797UniProt:Q9SJE2
Coordinates (TAIR10) chr1:-:2691546..2693409
Molecular Weight (calculated) 45689.60 Da
IEP (calculated) 8.86
GRAVY (calculated) -0.36
Length 412 amino acids
Sequence (TAIR10)
(BLAST)
001: MVATSATSSF FPVPSSSLDP NGKGNKIGST NLAGLNSAPN SGRMKVKPNA QAPPKINGKK VGLPGSVDIV RTDTETSSHP APRTFINQLP DWSMLLAAIT
101: TIFLAAEKQW MMLDWKPRRS DMLVDPFGIG RIVQDGLVFR QNFSIRSYEI GADRSASIET VMNHLQETAL NHVKTAGLLG DGFGSTPEMF KKNLIWVVTR
201: MQVVVDKYPT WGDVVEVDTW VSQSGKNGMR RDWLVRDCNT GETLTRASSV WVMMNKLTRR LSKIPEEVRG EIEPYFVNSD PVLAEDSRKL TKIDDKTADY
301: VRSGLTPRWS DLDVNQHVNN VKYIGWILES APVGIMERQK LKSMTLEYRR ECGRDSVLQS LTAVTGCDIG NLATAGDVEC QHLLRLQDGA EVVRGRTEWS
401: SKTPTTTWGT AP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)