suba logo
AT1G08125.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G73320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ISZEeggNOG:ENOG4111MATEMBL:CP002684EnsemblPlants:AT1G08125
EnsemblPlants:AT1G08125.1entrez:2745748ExpressionAtlas:F4HUD4Gene3D:3.40.50.150
GeneID:2745748GO:GO:0008168Gramene:AT1G08125.1hmmpanther:PTHR14614
hmmpanther:PTHR14614:SF30InterPro:IPR019410InterPro:IPR029063iPTMnet:F4HUD4
PaxDb:F4HUD4Pfam:PF10294PRIDE:F4HUD4ProteinModelPortal:F4HUD4
Proteomes:UP000006548RefSeq:NP_973791.1SMR:F4HUD4SUPFAM:SSF53335
TAIR:AT1G08125UniGene:At.47747UniGene:At.51525UniProt:F4HUD4
Coordinates (TAIR10) chr1:-:2539748..2542230
Molecular Weight (calculated) 35175.20 Da
IEP (calculated) 5.95
GRAVY (calculated) -0.36
Length 315 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPDRLNSPS TCTVTIEVLG HELDFAQDPN SKHLGTTVWD ASMVFAKYLG KNSRKGRFSS SKLKGKRAIE LGAGCGVAGF ALAMLGCDVV TTDQKEVLPL
101: LKRNVEWNTS RIVQMNPGSA FGSLRVAELD WGNEDHITAV EPPFDYVIGT DVVYSEQLLE PLLRTILALS GPKTTVMLGY EIRSTVVHEK MLQMWKDNFE
201: VKTIPRSKMD GEYQDPSIHL YIMAQKSAAE SSGNVSRDEV VIDTDETKCE TKVPTGECHK RVEEEAVVTH GPRLNEDSLL MRLRDGKLSE WEMRRYGTVA
301: AQLLRDVKID VQVKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)