AT4G31460.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Ribosomal L28 family | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Ribosomal L28 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28 (InterPro:IPR001383); Has 1063 Blast hits to 1063 proteins in 348 species: Archae - 0; Bacteria - 428; Metazoa - 98; Fungi - 129; Plants - 40; Viruses - 0; Other Eukaryotes - 368 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:15259773..15260847 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 24066.80 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.93 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.90 | ||||||||||||||||||||||||||||||||||||||||
Length | 212 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAFRGKEMMK KLVKKVGAEN ITPELKEKLK ACVPDTKVVM GRAKRGLYAG RHIQYGNRVS EDGGNKSRRC WKPNVQEKRL FSYIFDSHIK VKVTTHALRC 101: IDKAGGIDEY LLKTPYQKMD TEMGLYWKTK VEARYAELGQ MEVAFFNPED EAKLEQGFKD LNIAKKDARR EARRTFRKKG GGNKGDEEAS IEGGGGSESH 201: QEDDNGWLEA KA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)