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AT1G06520.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycerol-3-phosphate acyltransferase 1
Curator
Summary (TAIR10)
Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels.
Computational
Description (TAIR10)
glycerol-3-phosphate acyltransferase 1 (GPAT1); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 2 (TAIR:AT1G02390.1); Has 381 Blast hits to 368 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 362; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Protein Annotations
EC:2.3.1.15eggNOG:ENOG410IJNJeggNOG:ENOG410YBU6EMBL:AC007592
EMBL:AY088785EMBL:CP002684EnsemblPlants:AT1G06520EnsemblPlants:AT1G06520.1
entrez:837163ExpressionAtlas:Q9SHJ5GeneID:837163Genevisible:Q9SHJ5
GO:GO:0004366GO:GO:0005739GO:GO:0010143GO:GO:0016020
GO:GO:0016021GO:GO:0016024GO:GO:0016311GO:GO:0016791
GO:GO:0048235GO:GO:0080167GO:GO:0090447Gramene:AT1G06520.1
gramene_pathway:2.3.1.15gramene_pathway:2.3.1.51gramene_pathway:PWY-5667gramene_pathway:PWY0-1319
gramene_pathway:TRIGLSYN-PWYhmmpanther:PTHR15486hmmpanther:PTHR15486:SF0HOGENOM:HOG000237722
InParanoid:Q9SHJ5InterPro:IPR002123KEGG:ath:AT1G06520KO:K13508
OMA:LLAKSCYPaxDb:Q9SHJ5Pfam:PF01553Pfam:Q9SHJ5
PhylomeDB:Q9SHJ5PIR:G86200PRIDE:Q9SHJ5PRO:PR:Q9SHJ5
ProteinModelPortal:Q9SHJ5Proteomes:UP000006548RefSeq:NP_563768.1SMART:SM00563
STRING:3702.AT1G06520.1SUPFAM:0039877TAIR:AT1G06520tair10-symbols:ATGPAT1
tair10-symbols:GPAT1TMHMM:TMhelixUniGene:At.27686UniPathway:UPA00557
UniProt:Q0WPD4UniProt:Q9SHJ5
Coordinates (TAIR10) chr1:-:1994170..1996067
Molecular Weight (calculated) 66518.10 Da
IEP (calculated) 9.47
GRAVY (calculated) -0.02
Length 585 amino acids
Sequence (TAIR10)
(BLAST)
001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)