AT1G05510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.756 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF1264) | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: seed; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1264 (InterPro:IPR010686); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1264) (TAIR:AT2G31985.1); Has 295 Blast hits to 295 proteins in 126 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 67; Plants - 102; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:1629527..1630690 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27294.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.70 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.41 | ||||||||||||||||||||||||||||||||||||
| Length | 241 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKAVHLSTK NGPKVPGEPT KTGTSMVDTA ASAVQSFAPI NQIHQHLCAF HFYAYDMTRQ VEAHHFCGHI NEDMRQCLIY DGPDANARLI GLEYIVTEKL 101: FMTLPDDEKK LWHTHEWEVK GGFLFMPGVP EAIQRQDLEK VAKTYGKVYH FWQVDLGHQL PIGLPNIMMA VTRDGQLYPE MIKETEKQFG VSIDKERESR 201: AYMKGPDHGI HPLANGGGKG LKLELREVDI KPVESVPRVF V |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)