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AT1G05380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein (TAIR:AT4G14920.1); Has 4682 Blast hits to 3960 proteins in 222 species: Archae - 3; Bacteria - 7; Metazoa - 2969; Fungi - 456; Plants - 787; Viruses - 0; Other Eukaryotes - 460 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IH8XeggNOG:ENOG4111KXREMBL:AC005106EMBL:CP002684
EnsemblPlants:AT1G05380EnsemblPlants:AT1G05380.1EnsemblPlants:AT1G05380.2entrez:837039
Gene3D:3.30.40.10Gene3D:3.40.630.30GeneID:837039GO:GO:0008270
GO:GO:0016746Gramene:AT1G05380.1Gramene:AT1G05380.2hmmpanther:PTHR24098
hmmpanther:PTHR24098:SF10InterPro:IPR001965InterPro:IPR011011InterPro:IPR013083
InterPro:IPR016181InterPro:IPR019787InterPro:IPR032308KEGG:ath:AT1G05380
ncoils:CoilOMA:RIRSSIKPfam:PF00628Pfam:PF16135
Pfscan:PS50016PhylomeDB:Q9ZW00PROSITE:PS50016Proteomes:UP000006548
RefSeq:NP_001117233.1RefSeq:NP_563736.3SMART:SM00249SMR:Q9ZW00
STRING:3702.AT1G05380.1SUPFAM:SSF55729SUPFAM:SSF57903TAIR:AT1G05380
UniGene:At.15326UniProt:Q9ZW00
Coordinates (TAIR10) chr1:+:1577231..1582190
Molecular Weight (calculated) 126366.00 Da
IEP (calculated) 8.48
GRAVY (calculated) -0.69
Length 1138 amino acids
Sequence (TAIR10)
(BLAST)
0001: MEGGGGSGER SRIASNTPRS LKEKSDGVGR TVSSTETRQN YQKRSRMVVS DSESSDEFMK PPPRRSGVDR KTLGAKEKFV RKRDRVEHDR NGYVRRNNEA
0101: SGSFMKMNKL DIFEFDEYDG FDSANLMRKR FDNGSVGVRG RSSFASRRVD SSVGRSGSGR EGLFDRRRNT FVNGTCSASS QEDSSSESDS DEPMRVQGIN
0201: GVLKVKVNNK TNTLAASINP RDAEIYERPP SSRKAQRREN VVVKPPFRKS NNVDNNSESE ESDMSRKSKR KKSEYSKPKK EFNTKSKSTF PELVNPDVRE
0301: ERRGRRGGGT DKQRLRERIK GMLTDAGWTI DYKPRRNQSY LDAVYVNPSG TAYWSIIKAY DALLKQLKDE GVDARPRKDT AAVASVSEEI VNKLARKAKK
0401: TRSEMTKKWK QNSSGSDSEN KSEGGAYTDT SEERIRSSIK LGGKSTKKGR NGADWDELHK KSKRSLYYNN ARPSCGSDSH YLHGRKTKKI GRCTLLVRSS
0501: KDKKNPAING FNPYSGKRTL LSWLIESGVV QLRQKVQYMR RRGAKVMLEG WITREGIHCD CCSKILTVSR FEIHAGSKSC QPFQNIYLES GASLLQCQVR
0601: AWNMQKDATN LALHQVDTDG DDPNDDACGI CGDGGDLICC DGCPSTYHQN CLGMQVLPSG DWHCPNCTCK FCDAAVASGG KDGNFISLLS CGMCERRYHQ
0701: LCLNDEAHKV QSFGSASSFC GPKCLELFEK LQKYLGVKTE IEGGYSWSLI HRVDTDSDTN SQMSAQRIEN NSKLAVGLAI MDECFLPIVD RRSGVDLIRN
0801: VLYNCGSNFN RINYTGFYTA ILERGDEIIS AASLRFHGMQ LAEMPFIGTR HIYRRQGMCR RLFDAIESAM RSLKVEKLVI PAIPDFLHAW TGNFGFTPLD
0901: DSVRKEMRSL NTLVFPGIDM LQKPLLHEEN IIAPAAAGDA MISEVETEKK SEFTSSVEIG PYAVEGDEFV ADAANCYKDI LASDEDNILV SVETAMGTIC
1001: KPKDELSRHF RGEESGISSS PCQITLKSGT KHVLGHICDD TGSSCEDGLT DVNVEADASL LSQEIQQASA SFKVENNLSL SISGRGSSDL SSISQEVKSE
1101: QTSSNLDGVP SCKDYNILVP GAKLDKSKDD AFADGFLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)