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AT1G03687.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.773
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DTW domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DTW domain-containing protein; CONTAINS InterPro DOMAIN/s: DTW (InterPro:IPR005636); Has 580 Blast hits to 580 proteins in 298 species: Archae - 0; Bacteria - 527; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IFUKeggNOG:ENOG410Y13HEMBL:CP002684EnsemblPlants:AT1G03687
EnsemblPlants:AT1G03687.1entrez:839052ExpressionAtlas:F4I2G3GeneID:839052
Gramene:AT1G03687.1hmmpanther:PTHR21392hmmpanther:PTHR21392:SF4InParanoid:F4I2G3
InterPro:IPR005636KEGG:ath:AT1G03687OMA:KVWCLYPPaxDb:F4I2G3
Pfam:PF03942PhylomeDB:F4I2G3PRIDE:F4I2G3Proteomes:UP000006548
RefSeq:NP_171865.4SMART:SM01144STRING:3702.AT1G03687.1TAIR:AT1G03687
UniGene:At.42530UniProt:F4I2G3
Coordinates (TAIR10) chr1:+:918308..920306
Molecular Weight (calculated) 42919.60 Da
IEP (calculated) 8.21
GRAVY (calculated) -0.26
Length 381 amino acids
Sequence (TAIR10)
(BLAST)
001: MRCIAGASVA DFSPSLLFHR RNLVAVGQRL LMTSSILRSH TREFDVCDEG IISVEEWRKW GPVSPFPSAV KQIVDDLKVL ECKLDSPIDF GGNGGKLQGP
101: FGAYEDKKHR ATYEALDDPE KKFRFFSARQ VACRLLGSRG YLCQKCWLAM EDCMCSYVKP CGLWKRIRFW LYMHPRDFLR QNNTGKLLWQ IFGVQSATLC
201: VFGIAEDEEI MWNEFKRAGK SQVRCLYPNH NSEVTFSVKD AFGSSASENH VSSTTDEDKT LHFILLDGTW NNSAAMLKRL KDHAKSVWGD EDLPCISLAT
301: GASAMHKLRP QPSWDRTCTA AAAIGLLSEL SLLPQLSSYE LDKQADAVEE ALVILLDSLT GRRLRMGRSI TRKGRNTISM C
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)