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AT1G03030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); Has 3038 Blast hits to 3038 proteins in 1114 species: Archae - 9; Bacteria - 2199; Metazoa - 179; Fungi - 248; Plants - 85; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1072eggNOG:KOG2702EMBL:AK228726EMBL:BT022118
EMBL:BT025867EMBL:CP002684EnsemblPlants:AT1G03030EnsemblPlants:AT1G03030.1
entrez:839473Gene3D:3.40.50.300GeneID:839473GO:GO:0005524
GO:GO:0009507GO:GO:0016301Gramene:AT1G03030.1hmmpanther:PTHR10285
hmmpanther:PTHR10285:SF81HOGENOM:HOG000251927InterPro:IPR006083InterPro:IPR027417
KEGG:ath:AT1G03030OMA:ATWPQYDPfam:PF00485PhylomeDB:Q500U9
Proteomes:UP000006548RefSeq:NP_171802.2SMR:Q500U9STRING:3702.AT1G03030.1
SUPFAM:SSF52540TAIR:AT1G03030UniGene:At.11130UniProt:Q500U9
Coordinates (TAIR10) chr1:+:701621..703568
Molecular Weight (calculated) 34058.80 Da
IEP (calculated) 7.58
GRAVY (calculated) -0.33
Length 301 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVSSFSTVP RYCNSRSFVP ELSRFRGFKV HLWDQSLVPL HFSIRKRKNT PRYLISCSQK KDVTVVDGSC MDEIYDKLAE RLVPTAAAMF SPNLKRLVGL
101: AGPPGAGKST VANEVVRRVN KLWPQKAASF DAEVNPPDVA IVLPMDGFHL YRSQLDAMED PKEAHARRGA PWTFDPALLL NCLKKLKNEG SVYVPSFDHG
201: VGDPVEDDIF VSLQHKVVIV EGNYILLEEG SWKDISDMFD EKWFIDVNLD TAMQRVENRH ISTGKPPDVA KWRVDYNDRP NAELIIKSKT NADLLIRSMN
301: I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)