AT1G01760.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : adenosine deaminases;RNA binding;RNA binding;adenosine deaminases | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
adenosine deaminases;RNA binding;RNA binding;adenosine deaminases; FUNCTIONS IN: RNA binding, adenosine deaminase activity; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Adenosine deaminase/editase (InterPro:IPR002466); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:276412..278448 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46495.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.43 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.37 | ||||||||||||||||||||||||||||||||||||
| Length | 420 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEDWGKTVS EKVISAYMSL PKKGKPQGRE VTVLSAFLVS SPSQDPKVIA LGTGTKCVSG SLLSPRGDIV NDSHAEVVAR RALIRFFYSE IQRMQLTSGK 101: SNEAKRQRID SETSSILESA DSSCPGEVKY KLKSGCLLHL YISQLPCGYA STSSPLYALK KIPSTQVDDS LLVQASDICS SRHSDVPEIG SNSNKGNGSQ 201: VADMVQRKPG RGETTLSVSC SDKIARWNVL GVQGALLYQV LQPVYISTIT VGQSLHSPDN FSLADHLRRS LYERILPLSD ELLTSFRLNK PLFFVAPVPP 301: SEFQHSETAQ ATLTCGYSLC WNYSGLHEVI LGTTGRKQGT SAKGALYPST QSSICKQRLL ELFLKETHGH KRESSKSKKS YRELKNKATE YYLMSKIFKG 401: KYPFNNWLRK PLNCEDFLIN |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)