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AT5G49330.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : myb domain protein 111
Curator
Summary (TAIR10)
Member of the R2R3 factor gene family.
Computational
Description (TAIR10)
myb domain protein 111 (MYB111); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5147eggNOG:KOG0048EMBL:AB016872EMBL:AF371977EMBL:AY519634EMBL:CP002688EnsemblPlants:AT5G49330
EnsemblPlants:AT5G49330.1entrez:834993Gene3D:1.10.10.60GeneID:834993GO:GO:0003677GO:GO:0003700GO:GO:0006355
GO:GO:0051555Gramene:AT5G49330.1hmmpanther:PTHR10641hmmpanther:PTHR10641:SF595HOGENOM:HOG000152495InterPro:IPR001005InterPro:IPR009057
InterPro:IPR017930KEGG:ath:AT5G49330KO:K09422OMA:WECTSEEPfam:PF00249Pfscan:PS51294PhylomeDB:Q9FJ07
PROSITE:PS51294Proteomes:UP000006548RefSeq:NP_199744.1SMART:SM00717SMR:Q9FJ07STRING:3702.AT5G49330.1SUPFAM:SSF46689
TAIR:AT5G49330tair10-symbols:ATMYB111tair10-symbols:MYB111tair10-symbols:PFG3UniGene:At.26279UniProt:Q9FJ07
Coordinates (TAIR10) chr5:-:19999147..20001293
Molecular Weight (calculated) 38482.80 Da
IEP (calculated) 4.95
GRAVY (calculated) -0.73
Length 342 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRAPCCEKI GLKRGRWTAE EDEILTKYIQ TNGEGSWRSL PKKAGLLRCG KSCRLRWINY LRRDLKRGNI TSDEEEIIVK LHSLLGNRWS LIATHLPGRT
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)