AT5G07770.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.888 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Actin-binding FH2 protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Actin-binding FH2 protein; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:2474816..2479022 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76132.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.05 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||
| Length | 695 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSPVEITGAD AVVTPPMRGR VPLPPPPPPP MRRSAPSPPP MSGRVPPPPP PPPMFDPKGA GRVICCLRPG QNKSSLKRFQ CGKLTNAWEE LQRHGEAQTA 101: PEFDLSEIEA LFSAAVQNQA DKSGSRREAF EANPDKLQLI SGADALVPLP PPPPPMPRRS PPPPPPRFDA FDHKGARMGS LWDELQIQYG ESQTAIELDV 201: PEIETLFSVG AKPRPKPKPE KVPLIDLKRA NNTIVNLKIL KMPLPDMMAA VMAMDESVLD VDQIENLIQL CPTKEEMELL KNYTGDKATL GKSEQCLLEL 301: MKVPRFEAKL RVLSFKIPFG TKITKFRKML NVVNSACEEV RSSQMLKEIM KIILFLGNTL NQGTARGSAV GFRLDSLLIL SETRADNNKM TLMHYLCKVL 401: ASKAADLLDF HKDLQSLEST LEINLKSLAE EIHAITKGLE KLKQELTASE TDGPVSQVFR KLLKDFISSA ETQVATVSTL YSSARINADA LAHYFGEDPN 501: HYPFEKVSAT LLSFIRLFKK AHQENVKQED LEKKKAATED VFGGPDHNID SDTSLDDSEA KSPSRIRPPP SIPRPPSRPR YACCRIPAVN PPPRLVCGPY 601: PLPRLVRVGS PSPPPPSMSG GAPPPPPPPP MLVASRTAPP PHLSHVRSIP FQTRLVMGTS PLPLLVREGA PPPTLPSMSG GAPPPPPPLP MLRYQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)