suba logo
AT4G32840.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphofructokinase 6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphofructokinase 6 (PFK6); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 1 (TAIR:AT4G29220.1); Has 8046 Blast hits to 7506 proteins in 2189 species: Archae - 28; Bacteria - 5254; Metazoa - 679; Fungi - 399; Plants - 394; Viruses - 4; Other Eukaryotes - 1288 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G32840-MONOMERBRENDA:2.7.1.11EC:2.7.1.11eggNOG:COG0205eggNOG:KOG2440EMBL:AK227471EMBL:AL161582
EMBL:AY088020EMBL:BT006001EMBL:CP002687EnsemblPlants:AT4G32840EnsemblPlants:AT4G32840.1entrez:829420GeneID:829420
Genevisible:Q9M076GO:GO:0003872GO:GO:0005524GO:GO:0005829GO:GO:0006002GO:GO:0006096GO:GO:0046872
GO:GO:0061615Gramene:AT4G32840.1gramene_pathway:2.7.1.11gramene_pathway:GLYCOLYSISgramene_pathway:PWY-1042HAMAP:MF_01981hmmpanther:PTHR13697
hmmpanther:PTHR13697:SF7HOGENOM:HOG000016186InParanoid:Q9M076InterPro:IPR000023InterPro:IPR012004InterPro:IPR022953KEGG:00010+2.7.1.11
KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11KEGG:ath:AT4G32840KO:K00850OMA:DRMWARM
PaxDb:Q9M076Pfam:PF00365Pfam:Q9M076PhylomeDB:Q9M076PIR:T10691PIRSF:PIRSF000534PRIDE:Q9M076
PRINTS:PR00476PRO:PR:Q9M076ProteinModelPortal:Q9M076Proteomes:UP000006548Reactome:R-ATH-70171RefSeq:NP_195010.1SMR:Q9M076
STRING:3702.AT4G32840.1SUPFAM:SSF53784TAIR:AT4G32840tair10-symbols:PFK6UniGene:At.31631UniPathway:UPA00109UniProt:Q9M076
Coordinates (TAIR10) chr4:-:15845010..15848305
Molecular Weight (calculated) 50790.90 Da
IEP (calculated) 7.08
GRAVY (calculated) -0.17
Length 462 amino acids
Sequence (TAIR10)
(BLAST)
001: MASNGVDEQI KLVEGPAGYV LEDVPHLSDY ILDLPTYPNP LQSNAAYSVV RQYFVDEDDT VQEKIVVHKD SPRGTHFRRA GPRQKVYFKP SDVRACIVTC
101: GGLCPGLNTV IREIVCGLHF MYGVTEVIGV DCGFRGFYSK NTVALTPKTV SDIHKRGGTI LGTSRGGHDT SKIVDNIQDR EINQVYIIGG DGTQKGANAI
201: YKEIRRRGLK VAVAGIPKTI DNDIPVIDKS FGFDTAVEEA QRAINAAHVE ATSVENGIGI VKLMGRYSGF IAMYATLASR DVDCCLIPES PFYLEGKGGL
301: YEFIAKRLRE NGHMVIVIAE GAGQDLVAES IEQQDASGNK LLKDVGLWMS LKIKEYFAKH NVMDITLKYI DPTYMIRAIP ANASDNVYST LLAQSAVHGA
401: MAGYTGFVSG LVNGRHTYIP FNRITERQNK VVITDRMWAR MLSSTNQPSF MNPPKGTTEF TD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)