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AT5G44730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, phosphoglycolate phosphatase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, REG-2-like (InterPro:IPR011949), HAD-superfamily hydrolase, subfamily IA, variant 1 (InterPro:IPR006439); Has 2267 Blast hits to 2267 proteins in 873 species: Archae - 225; Bacteria - 1528; Metazoa - 193; Fungi - 90; Plants - 101; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1011eggNOG:KOG3085EMBL:AB016874EMBL:AC002342
EMBL:BT025712EMBL:CP002688EnsemblPlants:AT5G44730EnsemblPlants:AT5G44730.1
EnsemblPlants:AT5G44730.2entrez:834502Gene3D:3.40.50.1000GeneID:834502
GO:GO:0016787Gramene:AT5G44730.1Gramene:AT5G44730.2hmmpanther:PTHR12725
hmmpanther:PTHR12725:SF61HOGENOM:HOG000242006InterPro:IPR006439InterPro:IPR011949
InterPro:IPR023214KEGG:ath:AT5G44730OMA:NPRIYEIPfam:PF00702
PhylomeDB:O48587Proteomes:UP000006548RefSeq:NP_199286.1RefSeq:NP_974884.1
SMR:O48587STRING:3702.AT5G44730.1SUPFAM:SSF56784TAIR:AT5G44730
TIGRfam:TIGR01549TIGRfam:TIGR02252TIGRFAMs:TIGR01549TIGRFAMs:TIGR02252
UniGene:At.43614UniGene:At.49423UniProt:O48587
Coordinates (TAIR10) chr5:-:18045588..18046519
Molecular Weight (calculated) 28810.80 Da
IEP (calculated) 7.36
GRAVY (calculated) -0.07
Length 255 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVSLLSKLR CITVDVTGTL IAYKGELGDY YCMAAKAIGL PCPDYKRVHE GFKLAYTDMA QKYPCFGFHA KMPNIVWWKT CVRDSFVKAG YEYDEETFEK
101: IFRRIYSTFG SAAPYSVFQD SQPFLRWARR KGLIVGLVSN AEYRYQEVIL PSFGLSKAEW DFGVFSGIEG IEKPDPRIFT LALERAGNNI APEEVLHIGD
201: SMRKDYVPAK SIGMHALLVD RFKTEAAKDW IEAGAIVLPD LVAVQQLLES DKLKC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)