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AT4G33560.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.605
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Wound-responsive family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Wound-responsive family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function wound-induced (InterPro:IPR022251); BEST Arabidopsis thaliana protein match is: wound-responsive protein-related (TAIR:AT2G14070.1); Has 146 Blast hits to 145 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 146; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSD0eggNOG:ENOG41108X9EMBL:AL031394EMBL:AL161583
EMBL:BT024757EMBL:CP002687EnsemblPlants:AT4G33560EnsemblPlants:AT4G33560.1
entrez:829495GeneID:829495Gramene:AT4G33560.1hmmpanther:PTHR33090
hmmpanther:PTHR33090:SF7HOGENOM:HOG000238802InterPro:IPR022251KEGG:ath:AT4G33560
OMA:AGKQASWPfam:PF12609PIR:T04973Proteomes:UP000006548
RefSeq:NP_195082.1STRING:3702.AT4G33560.1TAIR:AT4G33560UniGene:At.31574
UniGene:At.68081UniProt:O81873
Coordinates (TAIR10) chr4:+:16135465..16135752
Molecular Weight (calculated) 10303.40 Da
IEP (calculated) 11.25
GRAVY (calculated) -0.09
Length 95 amino acids
Sequence (TAIR10)
(BLAST)
1: MNAGKQASWA VATAIAAVEV LKDQGVARWN YLFRLLHKEA MARVRTITVP SRPSPPTSSS SATSIRSKPL STTPFETSFE KAMGLSCFGP TTVRF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)