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AT4G27150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.727
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : seed storage albumin 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
seed storage albumin 2 (SESA2); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED DURING: seed development stages; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 3 (TAIR:AT4G27160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JWSWeggNOG:ENOG41104N4EMBL:AL035680EMBL:AL161566EMBL:BT002073EMBL:BT006557EMBL:CP002687
EMBL:M22034EMBL:Z17594EMBL:Z17598EMBL:Z24745EnsemblPlants:AT4G27150EnsemblPlants:AT4G27150.1entrez:828823
Gene3D:1.10.120.10GeneID:828823Genevisible:P15458GO:GO:0045735Gramene:AT4G27150.1hmmpanther:PTHR35496hmmpanther:PTHR35496:SF1
HOGENOM:HOG000123289InParanoid:P15458InterPro:IPR000617InterPro:IPR013771InterPro:IPR016140KEGG:ath:AT4G27150OMA:RDCEEHI
PaxDb:P15458Pfam:P15458Pfam:PF00234PhylomeDB:P15458PIR:JA0162PRIDE:P15458PRINTS:PR00496
PRO:PR:P15458ProteinModelPortal:P15458Proteomes:UP000006548RefSeq:NP_194445.1SMART:SM00499SMR:P15458STRING:3702.AT4G27150.1
SUPFAM:SSF47699TAIR:AT4G27150tair10-symbols:AT2S2tair10-symbols:SESA2TMHMM:TMhelixUniGene:At.43652UniProt:P15458
Coordinates (TAIR10) chr4:+:13609396..13609908
Molecular Weight (calculated) 19362.30 Da
IEP (calculated) 7.19
GRAVY (calculated) -0.52
Length 170 amino acids
Sequence (TAIR10)
(BLAST)
001: MANKLFLVCA TFALCFLLTN ASIYRTVVEF DEDDASNPMG PRQKCQKEFQ QSQHLRACQK LMRMQMRQGR GGGPSLDDEF DLEDDIENPQ GPQQGHQILQ
101: QCCSELRQEE PVCVCPTLRQ AARAVSLQGQ HGPFQSRKIY KTAKYLPNIC KIQQVGECPF QTTIPFFPPY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)