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AT4G23230.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 15
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 15 (CRK15); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 121584 Blast hits to 120147 proteins in 4447 species: Archae - 110; Bacteria - 13930; Metazoa - 44451; Fungi - 10585; Plants - 34122; Viruses - 456; Other Eukaryotes - 17930 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G23230-MONOMEREC:2.7.11.-eggNOG:COG0515eggNOG:ENOG410IKV1EMBL:AL022347EMBL:AL161559EMBL:AY062569
EMBL:AY128796EMBL:CP002687EnsemblPlants:AT4G23230EnsemblPlants:AT4G23230.1entrez:828422Gene3D:2.60.120.200GeneID:828422
Genevisible:Q8W4G6GO:GO:0004674GO:GO:0005524GO:GO:0016021Gramene:AT4G23230.1hmmpanther:PTHR27002HOGENOM:HOG000116550
InParanoid:Q8W4G6InterPro:IPR000719InterPro:IPR001245InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441KEGG:ath:AT4G23230PaxDb:Q8W4G6Pfam:PF01657Pfam:PF07714Pfam:Q8W4G6Pfscan:PS50011
Pfscan:PS51473PhylomeDB:Q8W4G6PIR:T04840PRIDE:Q8W4G6PRO:PR:Q8W4G6PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011PROSITE:PS51473ProteinModelPortal:Q8W4G6Proteomes:UP000006548RefSeq:NP_194054.2scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q8W4G6STRING:3702.AT4G23230.1SUPFAM:SSF56112TAIR:AT4G23230tair10-symbols:CRK15TMHMM:TMhelix
UniGene:At.27300UniProt:Q8W4G6
Coordinates (TAIR10) chr4:-:12157827..12159919
Molecular Weight (calculated) 56465.80 Da
IEP (calculated) 8.29
GRAVY (calculated) -0.11
Length 507 amino acids
Sequence (TAIR10)
(BLAST)
001: MLRYSDQNIL STLAYDGAWI RMNGNISIDQ NQMNRFKDFV SSTMNQAAVK AASSPRKFYT VKATWTALQT LYGLVQCTPD LTRQDCFSCL ESSIKLMPLY
101: KTGGRTLYSS CNSRYELFAF YNETTVRTQQ APPPLPPSST PLVTSPSLPG KSWNSNVLVV AIVLTILVAA LLLIAGYCFA KRVKNSSDNA PAFDGDDITT
201: ESLQLDYRMI RAATNKFSEN NKIGQGGFGE VYKGTFSNGT EVAVKRLSKS SGQGDTEFKN EVVVVAKLQH RNLVRLLGFS IGGGERILVY EYMPNKSLDY
301: FLFDPAKQNQ LDWTRRYKVI GGIARGILYL HQDSRLTIIH RDLKASNILL DADMNPKLAD FGLARIFGMD QTQENTSRIV GTFGYMAPEY AIHGQFSVKS
401: DVYSFGVLVL EIISGKKNNS FYETDGAHDL VTHAWRLWSN GTALDLVDPI IIDNCQKSEV VRCIHICLLC VQEDPAERPI LSTIFMMLTS NTVTLPVPLQ
501: PGFPVQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)