AT4G17140.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.379 mitochondrion 0.322 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : pleckstrin homology (PH) domain-containing protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pleckstrin homology-type (InterPro:IPR011993), Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:9613617..9636618 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 471249.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.82 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 4219 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MLEDQVAYLL QRYLGNYVRG LNKEALKISV WQGDVELKNM QLKPEALNAL KLPVRVKAGF LGSVKLKVPW TRLGQEPVVV YLDRIFVLAE PATDVEGLSE 0101: DSIQEAKRNL IREMETKLVE RARRLQTEMN KSWMGSVINT IVGNLKLSIS NIHIRYEDLE SNPGHPFSAG VTLEKLSAVT IDESGKETFI TGGTLDSIQK 0201: SVELDRLAFY LDSDMSPWHI DKPWEVLTPF EWDQIFRYGT KDGKPADCLT RKHFYILQPV SGNAKYSKSQ ANESSNAVQP LQKAYVNLDD VTLCLSKGGY 0301: RDVMKLADNF AAFNQRLKYA HYRPSVPVKI DAKSWWKYAY RVVSEQIKIA SGRMSWEHVL KYTSLRKRYI TQYASLLKSD ISRIVVDDDE EIEALDRELD 0401: TDVILQWRML AHKFVERSVQ AENYSKKQQA KSSWWPFGGK SEVSGGEGES IQFTDEDWER LNKVIGYKEG DEQSIINNAK PDALHTFLEV QMKRSASKLY 0501: DGEKECLAEL SCEGLNCSVK LFPETKIADI KLGRYRLSSP SGLLAESAPA SHSVLAVFCY KPFDAKVDWS LVAKASPCYM TYLKDSIDGI VNFFESSTAV 0601: SQTIALETAA AVQSTIDEVR RTAQEGMNRA LKDHSRFLLD LDIAAPKITI PTEFRPDNHR STKLLLDLGN LVIRSQDDYK HELTEEMDMY LQFDLVLSDV 0701: SALLVDGDYS WKQLSSKRAS SSGRESSVTF LPVIDKCGVL LKLQQIRRPN PAYPSTRLAV RLPSLGFHFS PARYHRLMQV AQIFQTKDDE SSQILRPWEE 0801: ADFEGWLSIL SWKGREASWQ RRYLCLVGPF IYVLESPGSK SYKKYTSLRG KHIYKVPVEL AGGVEHVLSI RNASRISEKV MEDVNALILM FDSEDSRKTW 0901: HSRLQGAVYR ASGSAPIAGL SDTSSDSEES ETEQKDGFDL SNLESVYVTG VLDELKICFS YGHQDDASFM AVLLARESKL FEFRALGGKV EVSMRGSDMF 1001: IGTVLKSLEI EDLVSHSGLN ESCYLARSFI QSSEMLPSFE DAESRSPERL DPTSSEGEEK FYEAPEILVD SIDYTSLRTP SFSRIDGLLP VDNKNITKPS 1101: NETTESLDSF VKAQIVIYHQ TSPQYKNIDN QVMVTLATLS FFCRRPTILA ILEFVNAINV EDPSCESFED NSPVAGEHTS PRRDGFEDSR DAAVKGLLGK 1201: GKSRIIFNLE LNMARAQIFL MNENGTKFAT LSQDNLLTDI KVFPNSFSIK ASLGNLRISD DSLPDNHMYF WICDMRDPGG TSFVELVFTS FSIIDEDYEG 1301: FDYCLSGQFS EVRIVYLNRF IQEVAEYFMG LVPSDSKGVV KMKDQITDSE KWFTTSEIEG SPALKLDLSL KKPIIVMPRH TDSPDYLKLD IVHITVDNTF 1401: QWFAGDKNEL NAVHVETMKI MVMDINLNVG SGAEIGESII QDVKGVSVTI NRSLRDLLHQ IPSIEVSIEI DELRAALSNR EYQILTECAQ SNISELPHAV 1501: PPLSGDVVTS SRNLHETLTS EDTNAAQTEK TDTWISMKVS VVINLVELCL YAGTARDTPL AAVQFFLEES RGHVIVLMGP YIFSISLAPF SVLISGGWLL 1601: YKSNTHDEGF LTATLKGFSV IDNREGTEKE FRLAVGRPAD LDFGDSHSVT DKNQGLTQSH VTTGSDIGPF PSMLTLDAQF GQLSTFVSVS IQRPQLLVAL 1701: DFLLAVVEFF VPTIGSVLSS EEDKNLNMVD AIVMDKSIYK QQTAEAFLSP LGPLIAEDEK FDNFVYDGNG GTLYLKDRNG GILSSPSIEP IIYVGSGKRL 1801: QFRNVVFKNG QVLDSCISLG ACSSYSVSRE DGVELEVYHK APQQDSERKE DPVSQSPSTT TERSTEMIIE FQAIGPELTF YNTSKDVVKT PLLSNKLLHA 1901: QLDAYGRVVI KNDEIKMSAH TLGLTMESNG VKILEPFDTF VKYSSVSGKT NIRLSVSNIF MNFSFSILRL FIAVEEDILS FLRMTSRKMT VVCSEFDKIG 2001: TIRNPCTDQI YAFWRPHPPP GFASLGDYLT PLDKPPTKGV LVVNTNLMRV KRPLSFKLIW SPLASGGLGG SSMDDKDERD SSCSIWFPEA PKGYVALSCV 2101: VSSGSTPPSL ASTFCILASS VSPCSLRDCV AISSTDISQS SLAFWRVDNS VGSFLPADPS TLNLLGRPYE LRHILFGSTA VLPKESSYVD DRTTPDDIIQ 2201: PTRPQPLNSV NSGHRFEAVA TFELIWWNRG SGSQKKVSIW RPIVSEGMAY FGDIAVSGYE PPNSCVVLHD TSDQEILKAA VDFQLVGRVK KHRGVESISF 2301: WMPQAPPGFV SLGCVACKGS PKPYDFTKLR CARSDMVAGD HFADESLWDT SDVWQRVEPF SIWSIGNELK TFIVRSGLKK PPRRFALKLA DQGLPGGTDN 2401: MVIHAEIGTF SAALFDDYGG LMVPLVNVSL NNISFGLLGK TDYTNSTINF SLAARSYNDK YEAWEPLIEP ADGFLRYQFN PRSFGAVSQL RLTSTKDLNV 2501: NISVSNANTI IQAYSSWNSL SNVHGYHKER GALPLVDNGK SVIEVHQKKN YFIIPQNKLG QDIYIRATEI KGFKDIVKMP SGDVRPVKVP VLTNMLDSHL 2601: RGELCRNPRI MVTVIVMDAQ LPRTCGLSSH QYTGVIRLSP NQTSPVESEL RQQSARTCGS VSNMLSSELE VVDWNEIFFF RIDSLDDFVL ELIVTDVGKG 2701: APVGSFSAPL KQIAQYMKDN VYQHNYANDL VWLDLSTTET MSINQGDQRK NCGKIRCAVL LPAKSKVDQS KSFREKKSGF LQVSPSIEGP WTTVRLNYAA 2801: PAACWRLGND VVASEVSMQD GNRYVNVRSL VSVENNTDFL LDLCLQSKVN SIPDIPIGLL KPGDTLPVPL SGLTQSASYV LKLKCVFPDG SDEYSWSSVV 2901: SRPGGAEVSC ESEPEICISA LTESEHLLFC TQINSTSSGD NQKLWFCLKT QATEIAKDIR SDPIQDWTLV VKSPFSIANC LPFGAEYSVL EAQASGHFIC 3001: RCRGVFISGE TVKVYSVDIR NPLYFSLLPQ RGWLPMHEAV LISHPNGVPA KTIGLRSSAT GRIAQVILEQ NYDEQQIVLS KIIRVYAPFW FSIARCPSLT 3101: LRLLDLSGKK QTRKVGLPFR SKKNDEVVLD EVTEEEIYEG HTIASTLNFK LLGLSVSISQ FGNQQHGPVK DLSALGDMDG SLDVDAYDPD GNCMRLFLST 3201: KPCAYQSVPT KVTSILSSTF SLLLHEPKVL HAYDSRVSFV FQPSGRDELQ VRLRETEWSF PVQVTREDTI VLVLKSKNGA RRYVKAEIRG FEEGSRFIVV 3301: FRLGPSNGPM RVENRSTVKS ISVRQSGFGE DSWVLLEPLT TENFAWEDPY GQKFLDAKVE SDHRSGVFKV DMEKGAVDSE LCRELEVNFD VQEIGDIKIA 3401: RFTDDDSTSQ SSNEIISLTS IGNHGYSTPQ TPTEHKTTTL EVIIEMGLVG ISLVDHMPKE LSYFYLERVF VSYSTGYDEG RTSRFKIILG RLQIDNQLPL 3501: TLMPVLLAPD NTGDSRQPVL KMTITMCNEE TDGIQVYPYV YVRVTDNTWR LNIHEPIIWA SADFYNKLQM DRLPKSSSVA QVDPEIHINL IDVSEVRLKV 3601: SLETAPAQRP HGILGVWSPI LSAVGNAFKI QVHLRRVMHR DRFIRKSSIL PAIGNRIWRD LIHNPLHLIF SVDVLGMTSS TLASLSKGFA ELSTDGQFMQ 3701: LRAKQVWSRR ITGVGDAIVQ GTEALAQGVA FGVSGVVTKP VESARENGIL GFAHGVGRAF LGFIVQPVSG ALDFFSLTVD GIGASCSRCL EVLSNRTALE 3801: RIRNPRAVHA DGILREYDEK EAIGQMLLHL AEASRHFGCT EIFREPSKFA LSDCYEEHFL VPYKRIVMVT NKRVVLLQCS DLDKMDKKPS KIMWDVPWEE 3901: LMALELAKAG SQRPSHLILH LKSFRKSESF AQVIKCSVPE DLNGLEPQAV RICSVVRKMW KAYQSNMKNL VLKVPSSQRH VYFAWNEADG RDSKTYKNKA 4001: IIKSRELSSS SSVSDDKKLV KHSINFSKIW SSERESKGRC SLCKKQDSED GGVCTIWRPS CPAGFVSVGD VAHVGSHPPN VAAVYNNTNG VFALPVGYDL 4101: VWRNCLDDYI SPVSIWHPRA PEGFVSPGCV AVAGFIEPEL NTVYCMPTSL AEQTEFEEQK VWSAPDSYPW ACQIYQVRSD ALHFMALRQT KEDSDWKAIR 4201: VRDDYRSIES ESGKNLRLE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)