AT4G17140.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : pleckstrin homology (PH) domain-containing protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1); Has 2762 Blast hits to 1565 proteins in 213 species: Archae - 0; Bacteria - 36; Metazoa - 1081; Fungi - 437; Plants - 621; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:9613617..9636618 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 471282.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.09 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||||||
| Length | 4218 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MLEDQVAYLL QRYLGNYVRG LNKEALKISV WQGDVELKNM QLKPEALNAL KLPVRVKAGF LGSVKLKVPW TRLGQEPVVV YLDRIFVLAE PATDVEGLSE 0101: DSIQEAKRNL IREMETKLVE RARRLQTEMN KSWMGSVINT IVGNLKLSIS NIHIRYEDLE SNPGHPFSAG VTLEKLSAVT IDESGKETFI TGGTLDSIQK 0201: SVELDRLAFY LDSDMSPWHI DKPWEVLTPF EWDQIFRYGT KDGKPADCLT RKHFYILQPV SGNAKYSKSQ ANESSNAVQP LQKAYVNLDD VTLCLSKGGY 0301: RDVMKLADNF AAFNQRLKYA HYRPSVPVKI DAKSWWKYAY RVVSEQIKIA SGRMSWEHVL KYTSLRKRYI TQYASLLKSD ISRIVVDDDE EIEALDRELD 0401: TDVILQWRML AHKFVERSVQ AENYSKKQQA KSSWWPFGGK SEVSGGEGES IQFTDEDWER LNKVIGYKEG DEQSIINNAK PDALHTFLEV QMKRSASKLY 0501: DGEKECLAEL SCEGLNCSVK LFPETKIADI KLGRYRLSSP SGLLAESAPA SHSVLAVFCY KPFDAKVDWS LVAKASPCYM TYLKDSIDGI VNFFESSTAV 0601: SQTIALETAA AVQSTIDEVR RTAQEGMNRA LKDHSRFLLD LDIAAPKITI PTEFRPDNHR STKLLLDLGN LVIRSQDDYK HELTEEMDMY LQFDLVLSDV 0701: SALLVDGDYS WKQLSSKRAS SSGRESSVTF LPVIDKCGVL LKLQQIRRPN PAYPSTRLAV RLPSLGFHFS PARYHRLMQV AQIFQTKDDE SSQILRPWEE 0801: ADFEGWLSIL SWKGREASWQ RRYLCLVGPF IYVLESPGSK SYKKYTSLRG KHIYKVPVEL AGGVEHVLSI RNASRISEKG LRSHSDDYSR KTWHSRLQGA 0901: VYRASGSAPI AGLSDTSSDS EESETEQKDG FDLSNLESVY VTGVLDELKI CFSYGHQDDA SFMAVLLARE SKLFEFRALG GKVEVSMRGS DMFIGTVLKS 1001: LEIEDLVSHS GLNESCYLAR SFIQSSEMLP SFEDAESRSP ERLDPTSSEG EEKFYEAPEI LVDSIDYTSL RTPSFSRIDG LLPVDNKNIT KPSNETTESL 1101: DSFVKAQIVI YHQTSPQYKN IDNQVMVTLA TLSFFCRRPT ILAILEFVNA INVEDPSCES FEDNSPVAGE HTSPRRDGFE DSRDAAVKGL LGKGKSRIIF 1201: NLELNMARAQ IFLMNENGTK FATLSQDNLL TDIKVFPNSF SIKASLGNLR ISDDSLPDNH MYFWICDMRD PGGTSFVELV FTSFSIIDED YEGFDYCLSG 1301: QFSEVRIVYL NRFIQEVAEY FMGLVPSDSK GVVKMKDQIT DSEKWFTTSE IEGSPALKLD LSLKKPIIVM PRHTDSPDYL KLDIVHITVD NTFQWFAGDK 1401: NELNAVHVET MKIMVMDINL NVGSGAEIGE SIIQDVKGVS VTINRSLRDL LHQIPSIEVS IEIDELRAAL SNREYQILTE CAQSNISELP HAVPPLSGDV 1501: VTSSRNLHET LTSEDTNAAQ TEKTDTWISM KVSVVINLVE LCLYAGTARD TPLAAVQISG GWLLYKSNTH DEGFLTATLK GFSVIDNREG TEKEFRLAVG 1601: RPADLDFGDS HSVTDKNQGL TQSHVTTGSD IGPFPSMLTL DAQFGQLSTF VSVSIQRPQL LVALDFLLAV VEFFVPTIGS VLSSEEDKNL NMVDAIVMDK 1701: SIYKQQTAEA FLSPLGPLIA EDEKFDNFVY DGNGGTLYLK DRNGGILSSP SIEPIIYVGS GKRLQFRNVV FKNGQVLDSC ISLGACSSYS VSREDGVELE 1801: VYHKAPQQDS ERKEDPVSQS PSTTTERSTE MIIEFQAIGP ELTFYNTSKD VVKTPLLSNK LLHAQLDAYG RVVIKNDEIK MSAHTLGLTM ESNGVKILEP 1901: FDTFVKYSSV SGKTNIRLSV SNIFMNFSFS ILRLFIAVEE DILSFLRMTS RKMTVVCSEF DKIGTIRNPC TDQIYAFWRP HPPPGFASLG DYLTPLDKPP 2001: TKGVLVVNTN LMRVKRPLSF KLIWSPLASG GLGGSSMDDK DERDSSCSIW FPEAPKGYVA LSCVVSSGST PPSLASTFCI LASSVSPCSL RDCVAISSTD 2101: ISQSSLAFWR VDNSVGSFLP ADPSTLNLLG RPYELRHILF GSTAVLPKES SYVDDRTTPD DIIQPTRPQP LNSVNSGHRF EAVATFELIW WNRGSGSQKK 2201: VSIWRPIVSE GMAYFGDIAV SGYEPPNSCV VLHDTSDQEI LKAAVDFQLV GRVKKHRGVE SISFWMPQAP PGFVSLGCVA CKGSPKPYDF TKLRCARSDM 2301: VAGDHFADES LWDTSDVWQR VEPFSIWSIG NELKTFIVRS GLKKPPRRFA LKLADQGLPG GTDNMVIHAE IGTFSAALFD DYGGLMVPLV NVSLNNISFG 2401: LLGKTDYTNS TINFSLAARS YNDKYEAWEP LIEPADGFLR YQFNPRSFGA VSQLRLTSTK DLNVNISVSN ANTIIQAYSS WNSLSNVHGY HKERGALPLV 2501: DNGKSVIEVH QKKNYFIIPQ NKLGQDIYIR ATEIKGFKDI VKMPSGDVRP VKVPVLTNML DSHLRGELCR NPRIMVTVIV MDAQLPRTCG LSSHQYTGVI 2601: RLSPNQTSPV ESELRQQSAR TCGSVSNMLS SELEVVDWNE IFFFRIDSLD DFVLELIVTD VGKGAPVGSF SAPLKQIAQY MKDNVYQHNY ANDLVWLDLS 2701: TTETMSINQG DQRKNCGKIR CAVLLPAKSK VDQSKSFREK KSGFLQVSPS IEGPWTTVRL NYAAPAACWR LGNDVVASEV SMQDGNRYVN VRSLVSVENN 2801: TDFLLDLCLQ SKVNSIPDIP IGLLKPGDTL PVPLSGLTQS ASYVLKLKCV FPDGSDEYSW SSVVSRPGGA EVSCESEPEI CISALTESEH LLFCTQINST 2901: SSGDNQKLWF CLKTQATEIA KDIRSDPIQD WTLVVKSPFS IANCLPFGAE YSVLEAQASG HFICRCRGVF ISGETVKVYS VDIRNPLYFS LLPQRGWLPM 3001: HEAVLISHPN GVPAKTIGLR SSATGRIAQV ILEQNYDEQQ IVLSKIIRVY APFWFSIARC PSLTLRLLDL SGKKQTRKVG LPFRSKKNDE VVLDEVTEEE 3101: IYEGHTIAST LNFKLLGLSV SISQFGNQQH GPVKDLSALG DMDGSLDVDA YDPDGNCMRL FLSTKPCAYQ SVPTKVTSIL SSTFSLLLHE PKVLHAYDSR 3201: VSFVFQPSGR DELQRHKNKR MVKNVVEGVH WKYVAYDICS VKPVRLLGAV RLRETEWSFP VQVTREDTIV LVLKSKNGAR RYVKAEIRGF EEGSRFIVVF 3301: RLGPSNGPMR VENRSTVKSI SVRQSGFGED SWVLLEPLTT ENFAWEDPYG QKFLDAKVES DHRSGVFKVD MEKGAVDSEL CRELEVNFDV QEIGDIKIAR 3401: FTDDDSTSQS SNEIISLTSI GNHGYSTPQT PTEHKTTTLE VIIEMGLVGI SLVDHMPKEL SYFYLERVFV SYSTGYDEGR TSRFKIILGR LQIDNQLPLT 3501: LMPVLLAPDN TGDSRQPVLK MTITMCNEET DGIQVYPYVY VRVTDNTWRL NIHEPIIWAS ADFYNKLQMD RLPKSSSVAQ VDPEIHINLI DVSEVRLKVS 3601: LETAPAQRPH GILGVWSPIL SAVGNAFKIQ VHLRRVMHRD RFIRKSSILP AIGNRIWRDL IHNPLHLIFS VDVLGMTSST LASLSKGFAE LSTDGQFMQL 3701: RAKQVWSRRI TGVGDAIVQG TEALAQGVAF GVSGVVTKPV ESARENGILG FAHGVGRAFL GFIVQPVSGA LDFFSLTVDG IGASCSRCLE VLSNRTALER 3801: IRNPRAVHAD GILREYDEKE AIGQMLLHLA EASRHFGCTE IFREPSKFAL SDCYEEHFLV PYKRIVMVTN KRVVLLQCSD LDKMDKKPSK IMWDVPWEEL 3901: MALELAKAGS QRPSHLILHL KSFRKSESFA QVIKCSVPED LNGLEPQAVR ICSVVRKMWK AYQSNMKNLV LKVPSSQRHV YFAWNEADGR DSKTYKNKAI 4001: IKSRELSSSS SVSDDKKLVK HSINFSKIWS SERESKGRCS LCKKQDSEDG GVCTIWRPSC PAGFVSVGDV AHVGSHPPNV AAVYNNTNGV FALPVGYDLV 4101: WRNCLDDYIS PVSIWHPRAP EGFVSPGCVA VAGFIEPELN TVYCMPTSLA EQTEFEEQKV WSAPDSYPWA CQIYQVRSDA LHFMALRQTK EDSDWKAIRV 4201: RDDYRSIESE SGKNLRLE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)