AT3G63280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.940 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NIMA-related kinase 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes AtNek4, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
NIMA-related kinase 4 (NEK4); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NIMA-related kinase 2 (TAIR:AT3G04810.2); Has 126311 Blast hits to 124068 proteins in 4177 species: Archae - 117; Bacteria - 14403; Metazoa - 46720; Fungi - 12754; Plants - 30797; Viruses - 521; Other Eukaryotes - 20999 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:23378582..23381362 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62901.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.43 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.54 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 555 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MERYEVLEQI GKGSFGSALL VRHKQERKKY VLKKIRLARQ SDRARRSAHQ EMELISTVRN PFVVEYKDSW VEKGCYVCIV IGYCQGGDMT DTIKRACGVH 101: FPEEKLCQWL VQLLMALDYL HSNHILHRDV KCSNIFLTKE QDIRLGDFGL AKILTSDDLT SSVVGTPSYM CPELLADIPY GSKSDIWSLG CCMYEMAAHK 201: PPFKASDVQT LITKIHKLIM DPIPAMYSGS FRGLIKSMLR KNPELRPSAN ELLNHPHLQP YISMVYMKLE SPRRSTFPLQ FSERDATLKE RRRSSFSNDR 301: RLNPSVSDTE AGSVSSSGKA SPTPMFNGRK VSEVTVGVVR EEIVPQRQEE AKKQSGAART PRVAGTSAKA STQRTVFKHE LMKVSNPTER RRRVSLPLVV 401: ENPYTYESDI TALCSLNSPD VSVNTPRFDK IAEFPEDIFQ NQNRETASRR EVARHSFSSP PCPPHGEDNS NGSITKDKCT VQKRSVSEVK QRRFDTSSYQ 501: QRAEALEGLL EFSAKLLQQE RYDELGVLLK PFGAERVSSR ETAIWLTKSF KEASV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)