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AT3G59690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : IQ-domain 13
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
IQ-domain 13 (IQD13); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 14 (TAIR:AT2G43680.1); Has 1694 Blast hits to 1201 proteins in 100 species: Archae - 0; Bacteria - 16; Metazoa - 93; Fungi - 40; Plants - 1224; Viruses - 44; Other Eukaryotes - 277 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVNBeggNOG:ENOG410YFU3EMBL:AL138659EMBL:AY128329
EMBL:BT001176EMBL:CP002686EnsemblPlants:AT3G59690EnsemblPlants:AT3G59690.1
entrez:825138GeneID:825138GO:GO:0005886Gramene:AT3G59690.1
hmmpanther:PTHR32295hmmpanther:PTHR32295:SF18HOGENOM:HOG000238563InterPro:IPR000048
InterPro:IPR025064KEGG:ath:AT3G59690OMA:MERRNDRPfam:PF00612
Pfam:PF13178Pfscan:PS50096PhylomeDB:Q9M199PIR:T49310
PROSITE:PS50096Proteomes:UP000006548RefSeq:NP_191528.1SMART:SM00015
SMR:Q9M199STRING:3702.AT3G59690.1TAIR:AT3G59690tair10-symbols:IQD13
UniGene:At.34589UniGene:At.73114UniProt:Q9M199
Coordinates (TAIR10) chr3:+:22049572..22051479
Molecular Weight (calculated) 58508.60 Da
IEP (calculated) 11.52
GRAVY (calculated) -0.92
Length 517 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)