AT4G14290.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.973 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G23540.1); Has 4662 Blast hits to 3260 proteins in 1050 species: Archae - 26; Bacteria - 2155; Metazoa - 438; Fungi - 142; Plants - 171; Viruses - 20; Other Eukaryotes - 1710 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:8225547..8230057 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61919.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.68 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||
| Length | 558 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEQLVNFVIR PPRAEYNPEH DLLEQEFLLK GRWYQRKDLE VKNIRGDILQ CSHYMPVERP EDRPLPCVIY CHGNSGCRAD ASEAAIVLLP SNITIFTLDF 101: SGSGLSGGEH VTLGWNEKDD LKAVVEYLRT DGNVSLIGLW GRSMGAVTSL MYGAEDPSIA AMVLDSPFSD LVDLMMELVD TYKFRLPKFT IKFAIQYMRR 201: AVQKKANFNI TDLNTIKVAK SCFVPVLFGH AVDDDFIQPH HSERIYEAYI GDKNIIKFDG DHNSPRPQFY FDSINIFFHN VLQPPEVVGP TFFDPVDDYF 301: AKGSWSTMQQ LSSPPSSAQK SLAPGSTSDA INEVRLKRPM SRTEVPSNDP SNQSSSETKE KESLEVSSSS SSDMISFDLS NGDPYPPHLA VALDDDQYVE 401: FHVDELADFP SNAEEEERML MEAVMKSLKD MEVEQTHQKK EPSRTNTETS EGNAAASTTE PELALSDTDS ASGPTPCNHD ARLSSVASVP SKTSDSLPGP 501: VNGFVPGASP KTSQNKNDVI DLSARTKATV TVVGRSSTSG NVLEGLLRRW DLNFFKSR |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)