AT3G62010.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages. | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22964945..22971149 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 141176.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.93 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||
| Length | 1251 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSIPKEPEQV MKMRDGSVLG KKTILKSDHF PGCQNKRMTP QIEGAPNYRQ ADSLRVHGVA IPTAVGIRNV LRHIGAHKDG KQVKVLWISL REEPVVYING 0101: RPFVLRDVEK PFTNLEYTGI NRVRVEQMEA RLKEDILMEA SRYGNKILVT DELPDGQMVD QWEPVSTDSL KTLLEVYEEL QAEGYLVDYE RVPITDEKSP 0201: KETDFDLLIR KISQADINTE IIFNCQMGRG RTTTGMVIAT LVYFKRTGAS DQGFPRNNSF GRIFKAGENI TVNLPNSEEA IRRGEYAVVR SLIRVLEGGV 0301: EGKRQVDKVI DKCASMQNLR EAIATYRSSI LRQPDEKKRE AALSFFVEYL ERYYFLICFA VYLHSEGAFL QSGSLGHVSF ADWMRARPEL YSILRRRDPM 0401: GALGYAAMKP SLIKIAESTD GRPHEMSVVA ALRSGAVLGS QTVLKSDHSP GCQILNLPER VEGAPNFREV PGFPVYGVAN PTIDGIRSVI ERVGSSRGGR 0501: PVFWHNMREE PVIYINGKPF VLREVERPYK NMLEYTGIDR DRVEGMEARL KEDILREAKR YDGAIMVIHE TKDGQIFDLW ENVDADSVQT PLEVYKCLEA 0601: DGFPIKYARV PITDGKAPKS SDFDTLTSNI ASASKDTAFV FNCQMGRGRT TTGTVIACLV KLRINYGRPI KVLYDVLTHE IVDEDSSSGG EETGSNNAEA 0701: RPRNSGRRTE EEQGRAFGMD DILLLWKITR LFDNGVESRE ALDAVIDRCS ALQNIREAVL QYRKVFNQQH VEPRVRSAAL KRGAEYLERY FRLIAFAAYL 0801: GSKAFDGFFV EGESKVTFKN WLHQRPEVQA MKWSIRLRPG RFFTIPEELR AQHESQHGDA VMESIVNERS GSVLSKGSIL KMYFFPGQRT SSRLQINGAP 0901: HVYKVDRYPV YSMATPTISG AKKMLAYLGT KLKEEGGGST ERIVVTDLRE EAVVYINGTP FVLRELSKPV DTLKHVGITG AVVESLETRL KEDILAEVRE 1001: TGGRMLLHRE EYSPASNQSR VIGYWENIQP ENVKTPAEVY AALKDENYNI SYRRIPLTRE KDALASDVDA IQYCKDDSAG SYLFVSHTGF GGVSYAMAIT 1101: CLLLQPGQNF TATPTTNSST LEEDDSPSGA CDEEALSMGD YRDILSLIRV LSHGPQSKSD VDGIVELCAG AGHLREDIVY YSKELNKLPI TKDENRSYIM 1201: DMGVKALRRY FYLITFRSYL YSTSPEEMKF LDWMKSRPEL GHLCHNLRID K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)